RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MED27Q6P2C8 311 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 C16orf87Q6PH81 154 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 ORMDL3Q8N138 153 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 APCDD1LQ8NCL9 501 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 OR2M7Q8NG81 312 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 OR51A7Q8NH64 312 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 NDNFQ8TB73 568 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 SMARCD1Q96GM5 515 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 FRMD8P1Q9BZ68 369 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 TDRD3Q9H7E2 651 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 DDIT4Q9NX09 232 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 DYSFO75923 2080 aa1.74□□□□□ -2.13
ECHDC1-201ENST00000368287 IGKV3D-11A0A0A0MRZ8 115 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 TRAV8-6A0A0B4J262 113 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 IGHV2OR16-5A0A0B4J2B6 119 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 VGLL3A8MV65 326 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 H0YC42 278 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 OR7C2O60412 319 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 SNAI1O95863 264 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 OTCP00480 354 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC35G6P0C7Q6 338 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 STAG3L2P0CL84 134 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 MTPNP58546 118 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 PPP1CAP62136 330 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 RPL31P62899 125 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 GRB2P62993 217 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC35B1P78383 322 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 XIAPP98170 497 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 KDSRQ06136 332 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 NKAIN1Q4KMZ8 207 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 CAVIN4Q5BKX8 364 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF678Q5SXM1 525 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 C6orf183Q5T699 404 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 PRSS54Q6PEW0 395 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 C16orf47Q6ZP98 133 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 TMEM136Q6ZRR5 245 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 PRNTQ86SH4 94 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 BBS7Q8IWZ6 715 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 SLC7A5P1Q8MH63 180 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ARHGAP18Q8N392 663 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 LINC00337Q8N6G1 96 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 OR1P1Q8NH06 330 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF420Q8TAQ5 688 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ING5Q8WYH8 240 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 HGDQ93099 445 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ZNF649Q9BS31 505 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 MS4A8Q9BY19 250 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 STMN4Q9H169 189 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 RWDD2AQ9UIY3 292 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 MIA3Q5JRA6 1907 aa1.73□□□□□ -2.13
ECHDC1-201ENST00000368287 ADAMTSL3P82987 1691 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 TRAV8-4A0A0B4J246 113 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 ISPDA4D126 451 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 TVP23AA6NH52 213 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 GOLGA8JA6NMD2 632 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 CLDN34H7C241 214 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 UPK1BO75841 260 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 DHRS3O75911 302 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 CSTAP01040 98 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 P01737 135 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 MMP7P09237 267 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 GOLGA8HP0CJ92 632 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 FLI1Q01543 452 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 IL15RAQ13261 267 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 DYNC1I2Q13409 638 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 WDR43Q15061 677 aaKnown RBP eCLIP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 ATP6V1FQ16864 119 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 FAM27D1Q5T7N8 215 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 HHATQ5VTY9 493 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 FAM131AQ6UXB0 335 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 DAZ4Q86SG3 579 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 PDPNQ86YL7 162 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 LINC00304Q8N9R0 145 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 OR10Z1Q8NGY1 313 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 SFXN5Q8TD22 340 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 TNFRSF14Q92956 283 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 SNF8Q96H20 258 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 CENPNQ96H22 339 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 ANGPTL4Q9BY76 406 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 LHX5Q9H2C1 402 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 FANCEQ9HB96 536 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 DAZ1Q9NQZ3 744 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 ENPP4Q9Y6X5 453 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 TNIKQ9UKE5 1360 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 PLXNB3Q9ULL4 1909 aa1.72□□□□□ -2.13
ECHDC1-201ENST00000368287 NUP205Q92621 2012 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 TMEM72A0PK05 275 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 CENPBD1B2RD01 187 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 MFNGO00587 321 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 MYL12BO14950 172 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 NDUFS5O43920 106 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 SCO1O75880 301 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 SEC11BP0C7V7 166 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 LIPCP11150 499 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 PRSS3P35030 304 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 CARD18P57730 90 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 PSMC5P62195 406 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 ST3GAL4Q11206 333 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 MAD2L1BPQ15013 274 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms