RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OR7D4Q8NG98 312 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CFAP20Q9Y6A4 193 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PCMT1P22061 227 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SP3Q02447 781 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR5AU1Q8NGC0 362 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 IGHV1-69-2A0A0G2JMI3 117 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NPSR1Q6W5P4 371 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TCF24Q7RTU0 167 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR10G3Q8NGC4 313 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GOSR2O14653 212 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SNU13P55769 128 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PRDX1Q06830 199 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GPNMBQ14956 572 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SMIM21Q3B7S5 101 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF776Q68DI1 518 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 H1FNTQ75WM6 255 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 WRAP73Q9P2S5 460 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 A0A1W2PR80 420 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ADAM20O43506 726 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 GABRA6Q16445 453 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RPUSD3Q6P087 351 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR2V1Q8NHB1 315 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SERTAD4Q9NUC0 356 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM8BA6NDV4 472 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OPN1SWP03999 348 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SLC35B1P78383 322 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RHOBP62745 196 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RPS21P63220 83 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SPNS3Q6ZMD2 512 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 BATF2Q8N1L9 274 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR2G2Q8NGZ5 317 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF649Q9BS31 505 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 IL21RQ9HBE5 538 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 CA14Q9ULX7 337 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 URB1O60287 2271 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MCRIP1C9JLW8 97 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 GPX5O75715 221 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 STC2O76061 302 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 C21orf33P30042 268 aaPredicted RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MBD3L1Q8WWY6 194 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TP53RKQ96S44 253 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PLA2G3Q9NZ20 509 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RNF181Q9P0P0 153 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TCRBV5S2A0A599 114 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MED19A0JLT2 244 aaPredicted RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 REG1BP48304 166 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SMPDL3BQ92485 455 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 GPA33Q99795 319 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MIEN1Q9BRT3 115 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM147Q9BVK8 224 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 LGALS2P05162 132 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ACAA2P42765 397 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM211Q6ICI0 200 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR52E5Q8NH55 327 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RHBDD1Q8TEB9 315 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ZIC2O95409 532 aaPredicted RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PSMB5P28074 263 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MAS1LP35410 378 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR4D1Q15615 310 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SLC16A12Q6ZSM3 486 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RFLNAQ6ZTI6 216 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 HHIPL1Q96JK4 782 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 FOXL1Q12952 345 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR10J3Q5JRS4 329 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SYT9Q86SS6 491 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 OR5K2Q8NHB8 316 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 Q96M85 177 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 KCNK6Q9Y257 313 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 CXorf1O96002 111 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SLC17A4Q9Y2C5 497 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SIVA1O15304 175 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PRB4P10163 310 aaPredicted RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RND3P61587 244 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM225Q6GV28 225 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PRO1933Q9H354 126 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PMS2P1A4D2B8 440 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 NME2P22392 152 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 UCP1P25874 307 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 CLDN6P56747 220 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 LDLRAD3Q86YD5 345 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PIGLQ9Y2B2 252 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TCEAL8Q8IYN2 117 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SEC22AQ96IW7 307 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 PPP1R3EQ9H7J1 279 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ELOVL3Q9HB03 270 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MICAL3Q7RTP6 2002 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF878C9JN71 531 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 NMBP08949 121 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 HOXB3P14651 431 aaPredicted RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 MRPS34P82930 218 aaKnown RBP3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM220Q6QAJ8 160 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 STPG3Q8N7X2 389 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 TRBV11-1A0A0K0K1C0 115 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 SOX2P48431 317 aa3.37□□□□□ -1.87
SYNE1-207ENST00000367255 RPS11P62280 158 aaKnown RBP eCLIP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms