RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 PRRX2Q99811 253 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 NME2P1O60361 137 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 ZBTB25P24278 435 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 PTAFRP25105 342 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 LPAL2Q16609 132 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 MRM1Q6IN84 353 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 NDFIP1Q9BT67 221 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 CLEC18AA5D8T8 446 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 B4GALT1P15291 398 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 P2RX3P56373 397 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 UBE2IP63279 158 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 RHBDD2Q6NTF9 364 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 CLEC18CQ8NCF0 446 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 FN3KRPQ9HA64 309 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 LTBP1Q14766 1721 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 TMEM272A0A1B0GTI8 110 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 PLPP3O14495 311 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 GRPP07492 148 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 SARGQ9BW04 601 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 NXF2Q9GZY0 626 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 SLC35B3Q9H1N7 401 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 GAB2Q9UQC2 676 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 ACSM4P0C7M7 580 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 OPRM1P35372 400 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 TGFBR1P36897 503 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 ATP6V1FQ16864 119 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 SSX9Q7RTT3 188 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 MTCH2Q9Y6C9 303 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 CADP27708 2225 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 CCSO14618 274 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 FAHP16930 419 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 GABRA4P48169 554 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 FBXW5Q969U6 566 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.69
CDC42BPA-203ENST00000366766 TNS1Q9HBL0 1735 aaKnown RBP10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 TRGV10A0A0A0MS01 117 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 A0A1W2PNR3 127 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 NGFRP08138 427 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 DRD3P35462 400 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 OR5V1Q9UGF6 321 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PHF3Q92576 2039 aaKnown RBP10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 IGHV3-20A0A0C4DH32 117 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 TNFSF11O14788 317 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 IGF2P01344 180 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 SRD5A2P31213 254 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 FAM58AQ8N1B3 248 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 FBLIM1Q8WUP2 373 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 TAAR3PQ9P1P4 343 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.76□□□□□ -0.693e-11■■■□□ 16.9
CDC42BPA-203ENST00000366766 MYOGP15173 224 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 HYAL4Q2M3T9 481 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 C19orf35Q6ZS72 473 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 CRLF2Q9HC73 371 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PDCD6O75340 191 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 BHLHE23Q8NDY6 225 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PSENENQ9NZ42 101 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 DCTN6O00399 190 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 MBPP02686 304 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 RAC3P60763 192 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PRSS42Q7Z5A4 293 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 RPS4Y2Q8TD47 263 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 RHOFQ9HBH0 211 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 COL4A1P02462 1669 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 OR13C7P0DN81 318 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 PTDSS2Q9BVG9 487 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 KCNE3Q9Y6H6 103 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 DOCK10Q96BY6 2186 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 TRAV17A0A0B4J275 112 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 CA11O75493 328 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 CNIH1O95406 144 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 SPANXN5Q5MJ07 72 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 NDUFB7P17568 137 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 C12orf49Q9H741 205 aa10.76□□□□□ -0.69
CDC42BPA-203ENST00000366766 EDDM3AQ14507 147 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 OR52N4Q8NGI2 321 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 A0A0B4J203 849 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 MPC2O95563 127 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 THNSL2Q86YJ6 484 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 OR4C3Q8NH37 302 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 GPR87Q9BY21 358 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 CREBBPQ92793 2442 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 FAM166BA8MTA8 275 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 NAT2P11245 290 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 CLDN23Q96B33 292 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 FOXB1Q99853 325 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 FOSL1P15407 271 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 ELLP55199 621 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 SSPNQ14714 243 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 OR5M1Q8NGP8 315 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 SDCBPO00560 298 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 HPP00738 406 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 PNLIPP16233 465 aa10.75□□□□□ -0.69
CDC42BPA-203ENST00000366766 KLHDC1Q8N7A1 406 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms