RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 RPS15AP62244 130 aaKnown RBP1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 GABRG1Q8N1C3 465 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 OR52E5Q8NH55 327 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 RCN3Q96D15 328 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 SMARCD1Q96GM5 515 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 SCGB3A2Q96PL1 93 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 PANX1Q96RD7 426 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 NAPGQ99747 312 aaPredicted RBP1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 CCNB1IP1Q9NPC3 277 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 TMEM100Q9NV29 134 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 TMEM38BQ9NVV0 291 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 TMCC3Q9ULS5 477 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 JCADQ9P266 1359 aa1.19□□□□□ -2.22
RNU6-553P-201ENST00000364047 SVILO95425 2214 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 BCKDKO14874 412 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 IFNW1P05000 195 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 CDK1P06493 297 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 ERCC1P07992 297 aaPredicted RBP1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 TEAD1P28347 426 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 SLC6A1P30531 599 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 GNRHRP30968 328 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 CFHR2P36980 270 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 NUDT2P50583 147 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 RPS15P62841 145 aaKnown RBP1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 KCTD16Q68DU8 428 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 LYPD6Q86Y78 171 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 RPRMLQ8N4K4 120 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 ZDHHC22Q8N966 263 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 APH1AQ96BI3 265 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 PPP1R36Q96LQ0 422 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 TMEM175Q9BSA9 504 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 ABCB9Q9NP78 766 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 MCUBQ9NWR8 336 aa1.18□□□□□ -2.22
RNU6-553P-201ENST00000364047 KCNE1BA0A087WTH5 132 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 SLC31A1O15431 190 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 FCN3O75636 299 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 UPK1BO75841 260 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 KRT16P08779 473 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 P0DMU3 169 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 FAM231AP0DMU4 169 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 FAM231CP0DMU5 169 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 HLA-GP17693 338 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 ZNF83P51522 516 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 ENDOGQ14249 297 aaKnown RBP1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 ORAOV1Q8WV07 137 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 MCUR1Q96AQ8 359 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 RNF170Q96K19 258 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 Q96MT0 163 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 CHP1Q99653 195 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 STMN4Q9H169 189 aaPredicted RBP1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 REEP1Q9H902 201 aa1.17□□□□□ -2.22
RNU6-553P-201ENST00000364047 ZNF608Q9ULD9 1512 aaPredicted RBP1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 MPHOSPH10O00566 681 aaKnown RBP1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 TRGV3P03979 118 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 GZMHP20718 246 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 SLC1A2P43004 574 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 MERTKQ12866 999 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 Q6ZQT7 251 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 ZCCHC24Q8N2G6 241 aaKnown RBP1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 TRIB3Q96RU7 358 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 AGMATQ9BSE5 352 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 FAM192AQ9GZU8 254 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 GEMIN7Q9H840 131 aaKnown RBP1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 GCNT4Q9P109 453 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 DDX19BQ9UMR2 479 aa1.16□□□□□ -2.22
RNU6-553P-201ENST00000364047 TRAV8-6A0A0B4J262 113 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 A0A0B4J2C4 111 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 TRGV4A0A0C4DH28 118 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 ZNF729A6NN14 1252 aaPredicted RBP1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 XRCC2O43543 280 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 CTAG2O75638 210 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 CCL23P55773 120 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 GABRA6Q16445 453 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 TMEM220Q6QAJ8 160 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 ZNF322Q6U7Q0 402 aaPredicted RBP1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 NDUFAF7Q7L592 441 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 BPIFB6Q8NFQ5 453 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 OR5H2Q8NGV7 314 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 ITFG1Q8TB96 612 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 CCDC77Q9BR77 488 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 THTPAQ9BU02 230 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 C20orf96Q9NUD7 363 aaPredicted RBP1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 HPCAL4Q9UM19 191 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 ZNF443Q9Y2A4 671 aaPredicted RBP1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 CACNA1GO43497 2377 aa1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 NPHP4O75161 1426 aaPredicted RBP1.15□□□□□ -2.23
RNU6-553P-201ENST00000364047 C9JQL5 133 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 G3V3Q6 166 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 TEX46H3BTG2 121 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 CACNG3O60359 315 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 SNRPAP09012 282 aaKnown RBP1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 OR4Q2P0C623 313 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 PTHLHP12272 177 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 GFAPP14136 432 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 RAB11AP62491 216 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 DHRS2Q13268 280 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 SPANXN2Q5MJ10 180 aa1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 EIF3MQ7L2H7 374 aaKnown RBP1.14□□□□□ -2.23
RNU6-553P-201ENST00000364047 SSX9Q7RTT3 188 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms