RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 THTPAQ9BU02 230 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 TAPBPLQ9BX59 468 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 PIGUQ9H490 435 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 TMEM9BQ9NQ34 198 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 DNAJB9Q9UBS3 223 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 GLS2Q9UI32 602 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 N6AMT1Q9Y5N5 214 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 ZNF780BQ9Y6R6 833 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 MUC17Q685J3 4493 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 KNTC1P50748 2209 aa-1.64□□□□□ -2.67
RNU6-340P-201ENST00000364005 ABCC4O15439 1325 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 PCDH11XQ9BZA7 1347 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 PTPRBP23467 1997 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SIGLEC1Q9BZZ2 1709 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 DNAH6Q9C0G6 4158 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 A0A0G2JMP0 313 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 A0A0X1KG70 313 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 RFPL4AA6NLU0 287 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 RFPL4AL1F8VTS6 287 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 M0R378 163 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 CLDN5O00501 218 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 LECT2O14960 151 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 P4HA2O15460 535 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SH2D1AO60880 128 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 OR7A10O76100 309 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 AQP8O94778 261 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 ZNF682O95780 498 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 C2P06681 752 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 IFNAR1P17181 557 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 AKT2P31751 481 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 HSPA1LP34931 641 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 GPX4P36969 197 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SLC18A1P54219 525 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 STX1BP61266 288 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SLC25A11Q02978 314 aaKnown RBP-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 HTR4Q13639 388 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 Q1T7F1 81 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 FAM229BQ4G0N7 80 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 C10orf55Q5SWW7 151 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 GORABQ5T7V8 394 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 TMEM42Q69YG0 159 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 LINC00696Q6ZRV3 163 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 CCDC50Q8IVM0 306 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SYCP3Q8IZU3 236 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SLC35F6Q8N357 371 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 LPCAT1Q8NF37 534 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 OR2T34Q8NGX1 318 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 OR2T3Q8NH03 318 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 HAUS1Q96CS2 278 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 CPB2Q96IY4 423 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 PGLYRP3Q96LB9 341 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 TMEM117Q9H0C3 514 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 HSD3B7Q9H2F3 369 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 TMEM231Q9H6L2 316 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 BFARQ9NZS9 450 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 PSMD13Q9UNM6 376 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 PPIL1Q9Y3C6 166 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 HES2Q9Y543 173 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 URGCP-MRPS24S4R325 110 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 SCN9AQ15858 1988 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 DOPEY2Q9Y3R5 2298 aa-1.65□□□□□ -2.67
RNU6-340P-201ENST00000364005 USP9XQ93008 2570 aaPredicted RBP-1.66□□□□□ -2.67
RNU6-340P-201ENST00000364005 LINC00854A0A1B0GVQ3 168 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 A4D1N5 150 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 TRAPPC13A5PLN9 417 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 CDC7O00311 574 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 CLDN3O15551 220 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 MED7O43513 233 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 CIAO1O76071 339 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 FGFR1OPO95684 399 aaKnown RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 HLA-AP01891 365 aaKnown RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 CDK1P06493 297 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 RNASE3P12724 160 aaKnown RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 ETS1P14921 441 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 U2AF2P26368 475 aaKnown RBP eCLIP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 HTR1DP28221 377 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 CHI3L1P36222 383 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 FBXW4P57775 412 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 ZNF117Q03924 483 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 GBE1Q04446 702 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 KLRB1Q12918 225 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 ITIH4Q14624 930 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 MESDQ14696 234 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 MAPRE2Q15555 327 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 MFSD4BQ5TF39 518 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 ZNF565Q8N9K5 539 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 FAM213BQ8TBF2 198 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 DEPDC1BQ8WUY9 529 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 FAM3CQ92520 227 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 SKA1Q96BD8 255 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 C7orf34Q96L11 122 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 RIT2Q99578 217 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 GPR21Q99679 349 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 MICU1Q9BPX6 476 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 ZNF471Q9BX82 626 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 SLIRPQ9GZT3 109 aaKnown RBP-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 SYTL2Q9HCH5 934 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 PCSK1NQ9UHG2 260 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 NUP50Q9UKX7 468 aa-1.66□□□□□ -2.68
RNU6-340P-201ENST00000364005 B9D1Q9UPM9 204 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms