RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ERCC1P07992 297 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 PAX1P15863 534 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 TNFRSF1AP19438 455 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 MTNR1BP49286 362 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 RBP2P50120 134 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 ATP1B3P54709 279 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 TMBIM6P55061 237 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 RIPPLY3P57055 190 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 TESK1Q15569 626 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 LHFPL2Q6ZUX7 228 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 C11orf53Q8IXP5 236 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 OR52N4Q8NGI2 321 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 TRMT10AQ8TBZ6 339 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 BORCS8Q96FH0 119 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 TLNRD1Q9H1K6 362 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 DECR2Q9NUI1 292 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 EDARQ9UNE0 448 aa10.5□□□□□ -0.73
NIF3L1-201ENST00000359683 AKAP9Q99996 3911 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 LRP5LA4QPB2 252 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 TRIM64BA6NI03 449 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 MAGEB3O15480 346 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 HPXP02790 462 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 GRPP07492 148 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 HCKP08631 526 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 OCMP0CE72 109 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 MYL9P24844 172 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 MTCP1P56278 107 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 LSM3P62310 102 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 ZNF154Q13106 437 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 KISS1Q15726 138 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 MPPED2Q15777 294 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 RNF144BQ7Z419 303 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 TPRA1Q86W33 373 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 ZNF573Q86YE8 665 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 BCL7BQ9BQE9 202 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 RBM38Q9H0Z9 239 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 SAP30LQ9HAJ7 183 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 PLEKHA6Q9Y2H5 1048 aa10.49□□□□□ -0.73
NIF3L1-201ENST00000359683 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 DPPA5A6NC42 116 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 TPD52L2O43399 206 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 SDC2P34741 201 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 TGFBR1P36897 503 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 PMELP40967 661 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 EFNA4P52798 201 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 VBP1P61758 197 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 NCS1P62166 190 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 DDI2Q5TDH0 399 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 PRAMEF6Q5VXH4 476 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 ANGPTL5Q86XS5 388 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 CALHM1Q8IU99 346 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 NKAIN3Q8N8D7 197 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 SCCPDHQ8NBX0 429 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 RAB2BQ8WUD1 216 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 FOXRED1Q96CU9 486 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 GFI1Q99684 422 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 GCM1Q9NP62 436 aa10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 AK6Q9Y3D8 172 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-201ENST00000359683 IGHV3-64DA0A0J9YX35 117 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 PDCD5O14737 125 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 NDUFS7O75251 213 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 MPZP25189 248 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 ZNF93P35789 620 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 CFHR2P36980 270 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 HAAOP46952 286 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 PSMD7P51665 324 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 ZP1P60852 638 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 MRPS11P82912 194 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 GLT8D1Q68CQ7 371 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 MOGAT3Q86VF5 341 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 Q8TCH9 128 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 AQP3Q92482 292 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 CPNE2Q96FN4 548 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 PKIBQ9C010 78 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 METTL17Q9H7H0 456 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 FN3KRPQ9HA64 309 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 NDUFA13Q9P0J0 144 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 IGHV1-69-2A0A0G2JMI3 117 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 SMIM31A0A1B0GVY4 71 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 J3QT63 122 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 CDIPTO14735 213 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 CDRT1O95170 752 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 ACAA1P09110 424 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 RAB3BP20337 219 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 DNASE1P24855 282 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 COL8A2P25067 703 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 PDZK1IP1Q13113 114 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 C1orf100Q5SVJ3 147 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 HAGHLQ6PII5 290 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 ASCL4Q6XD76 172 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 NR2C2APQ86WQ0 139 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 RDH5Q92781 318 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 NINJ1Q92982 152 aa10.47□□□□□ -0.73
NIF3L1-201ENST00000359683 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms