RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ZNF436Q9C0F3 470 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SLITRK2Q9H156 845 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 OR51B6Q9H340 312 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 GPR84Q9NQS5 396 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 PLEK2Q9NYT0 353 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 NLKQ9UBE8 527 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 KLF13Q9Y2Y9 288 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 COL6A6A6NMZ7 2263 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 A0A1B0GTI1 187 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 LOC102725191A0A1B0GVB3 256 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 A0A1W2PR80 420 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF503-AS2A6NEH8 195 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SYT7O43581 403 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 VAMP5O95183 116 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SCGB1D2O95969 90 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 MT-ND4P03905 459 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 CD1AP06126 327 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF708P17019 499 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF32P17041 273 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 CSRP1P21291 193 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 FKBP2P26885 142 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 INPP1P49441 399 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 NUTF2P61970 127 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SCN1BQ07699 218 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SNTB1Q13884 538 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SLC10A1Q14973 349 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 HFEQ30201 348 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SNAI3Q3KNW1 292 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ABLIM2Q6H8Q1 611 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 NUFIP2Q7Z417 695 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 C19orf18Q8NEA5 215 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 OR52N4Q8NGI2 321 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 OR4D6Q8NGJ1 314 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 OR5D18Q8NGL1 313 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ACOT12Q8WYK0 555 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 C14orf144Q96I85 54 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 LYZL4Q96KX0 146 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 IP6K3Q96PC2 410 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SORCS2Q96PQ0 1159 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 FYTTD1Q96QD9 318 aaKnown RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 THAP7Q9BT49 309 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-202ENST00000359366 BEX2Q9BXY8 128 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 NELFAQ9H3P2 528 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 TREM1Q9NP99 234 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 SLC7A10Q9NS82 523 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 KLK11Q9UBX7 282 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 HHLA2Q9UM44 414 aa4.45□□□□□ -1.7
ATXN3-202ENST00000359366 ITPR1Q14643 2758 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 A0A0B4J293 547 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 A0A1W2PN81 502 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PDCD5O14737 125 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CYTIPO60759 359 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 MRPL33O75394 65 aaKnown RBP4.44□□□□□ -1.7
ATXN3-202ENST00000359366 HLA-HP01893 362 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 RLN2P04090 185 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 FAHP16930 419 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CCNOP22674 350 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 DNASE1P24855 282 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CHRNA7P36544 502 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF84P51523 738 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CCR6P51684 374 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 RRADP55042 308 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PSMA6P60900 246 aaKnown RBP4.44□□□□□ -1.7
ATXN3-202ENST00000359366 POU4F3Q15319 338 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 C2orf76Q3KRA6 126 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CHRFAM7AQ494W8 412 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 UBE2NLQ5JXB2 153 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 C10orf128Q5T292 105 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 C3P1Q6ZMU1 363 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 DMRTC2Q8IXT2 367 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-202ENST00000359366 BATF2Q8N1L9 274 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 C9orf62Q8N4C0 152 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 ZFP62Q8NB50 900 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CMBLQ96DG6 245 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 ZCCHC4Q9H5U6 513 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 GPR35Q9HC97 309 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PRSS50Q9UI38 385 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PLEKHA6Q9Y2H5 1048 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 ARID1AO14497 2285 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 TRGV5A0A0B4J1U4 118 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM272A0A1B0GTI8 110 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 VSTM5A8MXK1 200 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 LYRM1O43325 122 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 SMPD2O60906 423 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 SYNGR4O95473 234 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PLATP00750 562 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 CD2P06729 351 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 NDUFB7P17568 137 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 PTH2RP49190 550 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 RAB2AP61019 212 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 RAB5BP61020 215 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 ARF1P84077 181 aaKnown RBP4.44□□□□□ -1.7
ATXN3-202ENST00000359366 NHLH2Q02577 135 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 GPR176Q14439 515 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 RAB11BQ15907 218 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 GUCA2BQ16661 112 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 MOGAT2Q3SYC2 334 aa4.44□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM255AQ5JRV8 349 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms