RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 NKIRAS2Q9NYR9 191 aa21.47■■□□□ 1.03
SSBP3-202ENST00000357475 LYNX1G3V0Z9 82 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 LYNX1P0DP58 116 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 TNFSF4P23510 183 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 MYL9P24844 172 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 RBP2P50120 134 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 KISS1Q15726 138 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 PCGF3Q3KNV8 242 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 MOGAT3Q86VF5 341 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 NDNFQ8TB73 568 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 ISOC1Q96CN7 298 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 RAB1BQ9H0U4 201 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 SAP30LQ9HAJ7 183 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 C14orf119Q9NWQ9 140 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 DCAF16Q9NXF7 216 aa21.46■■□□□ 1.03
SSBP3-202ENST00000357475 CDC14BO60729 498 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 CDRT1O95170 752 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 PTBP3O95758 552 aaKnown RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 ALDOBP05062 364 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 HAAOP46952 286 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 SRP9P49458 86 aaKnown RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 FOXB2Q5VYV0 432 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 HAGHLQ6PII5 290 aaPredicted RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 LHFPL2Q6ZUX7 228 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 SCCPDHQ8NBX0 429 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 SLITRK2Q9H156 845 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 GCM1Q9NP62 436 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 ASH1LQ9NR48 2969 aaKnown RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 ANKRD17O75179 2603 aaKnown RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 CDIPTO14735 213 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 SYNGR1O43759 233 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 RHBDL1O75783 438 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 MTNR1BP49286 362 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 TMBIM6P55061 237 aa21.45■■□□□ 1.02
SSBP3-202ENST00000357475 FBXO9Q9UK97 447 aaPredicted RBP21.45■■□□□ 1.02
SSBP3-202ENST00000357475 A0A0G2JK05 382 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 LRP5LA4QPB2 252 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 A6NLC8 198 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 TMEM210A6NLX4 147 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 H3BMQ9 156 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 SPRY1O43609 319 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-202ENST00000357475 IGHV4-39P01824 125 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 ZNF93P35789 620 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-202ENST00000357475 OR3A4PP47883 348 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 ATP1B3P54709 279 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 SPCS2Q15005 226 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 TESK1Q15569 626 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 BATF2Q8N1L9 274 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 JAGN1Q8N5M9 183 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 CELF2-AS1Q8N7Q2 184 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 RAB2BQ8WUD1 216 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 YIPF5Q969M3 257 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 LURAP1Q96LR2 239 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 TLNRD1Q9H1K6 362 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 CXorf56Q9H5V9 222 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 CSMD1Q96PZ7 3565 aa21.44■■□□□ 1.02
SSBP3-202ENST00000357475 PDZD2O15018 2839 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 MAGEB3O15480 346 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 ANGPTL7O43827 346 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 COL8A2P25067 703 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 RPS19P39019 145 aaKnown RBP21.43■■□□□ 1.02
SSBP3-202ENST00000357475 GATA4P43694 442 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 SERPINB10P48595 397 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 POU3F4P49335 361 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 ZP1P60852 638 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 C1QL2Q7Z5L3 287 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 EGLN1Q9GZT9 426 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 METTL17Q9H7H0 456 aaPredicted RBP21.43■■□□□ 1.02
SSBP3-202ENST00000357475 CNTD2Q9H8S5 307 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 C1orf123Q9NWV4 160 aa21.43■■□□□ 1.02
SSBP3-202ENST00000357475 CCDC160A6NGH7 325 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 ERCC1P07992 297 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-202ENST00000357475 RAB3BP20337 219 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 NKAIN3Q8N8D7 197 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 OR4D6Q8NGJ1 314 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 AQP3Q92482 292 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 C12orf43Q96C57 262 aaKnown RBP21.42■■□□□ 1.02
SSBP3-202ENST00000357475 ZNF488Q96MN9 340 aa21.42■■□□□ 1.02
SSBP3-202ENST00000357475 ZNF701Q9NV72 531 aaPredicted RBP21.42■■□□□ 1.02
SSBP3-202ENST00000357475 IGKV1-12A0A0C4DH73 117 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 IGKV1D-12P01611 117 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 CD37P11049 281 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 MZT1Q08AG7 82 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 WDR82Q6UXN9 313 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 SLC25A26Q70HW3 274 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 ZNF573Q86YE8 665 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 NEU4Q8WWR8 484 aaPredicted RBP21.41■■□□□ 1.02
SSBP3-202ENST00000357475 PERPQ96FX8 193 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 GPER1Q99527 375 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 PPP1R3CQ9UQK1 317 aa21.41■■□□□ 1.02
SSBP3-202ENST00000357475 IGHV1-69-2A0A0G2JMI3 117 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 MEGF11A6BM72 1044 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 J3QT63 122 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 F12P00748 615 aaPredicted RBP21.4■■□□□ 1.02
SSBP3-202ENST00000357475 TNFRSF1AP19438 455 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 PDZK1IP1Q13113 114 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 SLAMF9Q96A28 289 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 FAM192AQ9GZU8 254 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 V9GY05 133 aa21.4■■□□□ 1.02
SSBP3-202ENST00000357475 ARID1AO14497 2285 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms