RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 SYT6Q5T7P8 510 aaPredicted RBP11.73□□□□□ -0.53
SEC13-202ENST00000350697 UBE2UQ5VVX9 321 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 FOXB2Q5VYV0 432 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 CLVS1Q8IUQ0 354 aaPredicted RBP11.73□□□□□ -0.53
SEC13-202ENST00000350697 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 MAPK1IP1LQ8NDC0 245 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 RAB2BQ8WUD1 216 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 OR51I2Q9H344 312 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 ACOT13Q9NPJ3 140 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 PTTG2Q9NZH5 202 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 CEPT1Q9Y6K0 416 aa11.73□□□□□ -0.53
SEC13-202ENST00000350697 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 hCG_1807616A0A1W2PRN6 198 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 ISPDA4D126 451 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 CDIPTO14735 213 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 FSTL3O95633 263 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 IGHV2-70P01814 119 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 CD2P06729 351 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 OCM2P0CE71 109 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 CFHR2P36980 270 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 MAP2K4P45985 399 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 FUT6P51993 359 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 CNPY1Q3B7I2 92 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 ZNF367Q7RTV3 350 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 ZNF573Q86YE8 665 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 SERPINA12Q8IW75 414 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 SCCPDHQ8NBX0 429 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 OR5D14Q8NGL3 314 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 RPL3LQ92901 407 aaKnown RBP11.72□□□□□ -0.53
SEC13-202ENST00000350697 NARFLQ9H6Q4 476 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 ISYNA1Q9NPH2 558 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 ABCA1O95477 2261 aa11.72□□□□□ -0.53
SEC13-202ENST00000350697 YLPM1P49750 1951 aaKnown RBP11.71□□□□□ -0.53
SEC13-202ENST00000350697 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 TRBV5-5A0A0J9YX44 114 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 PPIAL4DF5H284 164 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 WNT9BO14905 357 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 LHBP01229 141 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 ATF1P18846 271 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
SEC13-202ENST00000350697 SOX2P48431 317 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 RPS11P62280 158 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC13-202ENST00000350697 GPR50Q13585 617 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 ZMYND11Q15326 602 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 LRRC28Q86X40 367 aaPredicted RBP11.71□□□□□ -0.53
SEC13-202ENST00000350697 MUC20Q8N307 709 aaPredicted RBP11.71□□□□□ -0.53
SEC13-202ENST00000350697 DNAAF1Q8NEP3 725 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 OR10Z1Q8NGY1 313 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 CLDND2Q8NHS1 167 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 TRMT10AQ8TBZ6 339 aaKnown RBP11.71□□□□□ -0.53
SEC13-202ENST00000350697 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 TMEM106AQ96A25 262 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 SPSB1Q96BD6 273 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 BORCS8Q96FH0 119 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 ZCCHC4Q9H5U6 513 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 PPIAL4AQ9Y536 164 aa11.71□□□□□ -0.53
SEC13-202ENST00000350697 IGKV1-9A0A0C4DH69 117 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 FAM230AA0A1W2PPH8 454 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 ALX3O95076 343 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 ZNF205O95201 554 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 HEXAP06865 529 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 OCMP0CE72 109 aaPredicted RBP11.7□□□□□ -0.54
SEC13-202ENST00000350697 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 PRKACBP22694 351 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 PSMB9P28065 219 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 HAAOP46952 286 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 RBP2P50120 134 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 MLLT11Q13015 90 aaPredicted RBP11.7□□□□□ -0.54
SEC13-202ENST00000350697 TMEM249Q2WGJ8 235 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 Q499Y3 187 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 FAM201AQ5SY85 155 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 HAGHLQ6PII5 290 aaPredicted RBP11.7□□□□□ -0.54
SEC13-202ENST00000350697 SPICQ8N5J4 248 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 BOLLQ8N9W6 283 aaKnown RBP11.7□□□□□ -0.54
SEC13-202ENST00000350697 OR13C5Q8NGS8 318 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 OR13C9Q8NGT0 318 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 ZNF671Q8TAW3 534 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 AQP3Q92482 292 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 UFD1Q92890 307 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 TMIGD2Q96BF3 282 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 ISOC1Q96CN7 298 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 MGLLQ99685 303 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 GAL3ST1Q99999 423 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 TMEM165Q9HC07 324 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 NEK6Q9HC98 313 aa11.7□□□□□ -0.54
SEC13-202ENST00000350697 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
SEC13-202ENST00000350697 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 J3QT63 122 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 SULT1B1O43704 296 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms