RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 PTGER4P35408 488 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 SSR4P51571 173 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 TSPO2Q5TGU0 170 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 OR2A2Q6IF42 318 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 PIGMQ9H3S5 423 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 PROK2Q9HC23 129 aa16.72■□□□□ 0.27
LYSMD4-202ENST00000344791 F8W036 122 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 CSTBP04080 98 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 COX6A1P12074 109 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 ADCYAP1P18509 176 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 BLOC1S1P78537 153 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 CYCSP99999 105 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 HGFACQ04756 655 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 AKIRIN2Q53H80 203 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 OPN5Q6U736 354 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 CBLN2Q8IUK8 224 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 SGK3Q96BR1 496 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 CHST5Q9GZS9 411 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 CYTL1Q9NRR1 136 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 C14orf166Q9Y224 244 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 TRAPPC6AO75865 159 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 PDGFBP01127 241 aaPredicted RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 ADH6P28332 368 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 PNLIPRP3Q17RR3 467 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 IAH1Q2TAA2 248 aaPredicted RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 RPL7L1Q6DKI1 246 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 RPS19BP1Q86WX3 136 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 SSC4DQ8WTU2 575 aa16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 LSM5Q9Y4Y9 91 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-202ENST00000344791 KLF7O75840 302 aaPredicted RBP16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 FARS2O95363 451 aaKnown RBP16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 NAT1P18440 290 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 SPINK2P20155 84 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 CPT2P23786 658 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 ID4P47928 161 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 LSM6P62312 80 aaKnown RBP16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 LPAL2Q16609 132 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 ACTBL2Q562R1 376 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 MAML2Q8IZL2 1156 aaPredicted RBP16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 PUSL1Q8N0Z8 303 aaKnown RBP16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 OR14L1PQ8NHC6 308 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 SMOC1Q9H4F8 434 aa16.71■□□□□ 0.26
LYSMD4-202ENST00000344791 NCOR1O75376 2440 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 NSG1A0A0A6YYJ2 146 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 PRF1P14222 555 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 NME2P22392 152 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 TAS2R46P59540 309 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 RSU1Q15404 277 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 KCNMB1Q16558 191 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 Q7L0L9 218 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 CCDC36Q8IYA8 594 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 ZIC4Q8N9L1 334 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 HAS2Q92819 552 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 DNTTIP1Q9H147 329 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 RAB18Q9NP72 206 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 TMEM218A2RU14 115 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 ZNF850A8MQ14 1090 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 ATG12O94817 140 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 OTX2P32243 289 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 RBMXP38159 391 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 RIPPLY1Q0D2K3 151 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 LHFPL1Q86WI0 220 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 TMEM123Q8N131 208 aa16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 NUDT16L1Q9BRJ7 211 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-202ENST00000344791 CCDC187A0A096LP49 1063 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 SGCEO43556 437 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 THBS4P35443 961 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 ZNF84P51523 738 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 DSCR4P56555 118 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 PDSS1Q5T2R2 415 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 C9orf135Q5VTT2 229 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 PRSS54Q6PEW0 395 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 SULF2Q8IWU5 870 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 FAM89BQ8N5H3 189 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 SPTSSAQ969W0 71 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 REEP6Q96HR9 211 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 SLC26A1Q9H2B4 701 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 SHANK1Q9Y566 2161 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 C9J4A7 227 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 RFPL3SP0C7P2 107 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 NAT2P11245 290 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 RPS2P15880 293 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 RFC3P40938 356 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 PIGYQ3MUY2 71 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 PEG10Q86TG7 708 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 RNF141Q8WVD5 230 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 LIME1Q9H400 295 aa16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 NXT1Q9UKK6 140 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-202ENST00000344791 IGKV1-27A0A075B6S5 117 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 PMS2P1A4D2B8 440 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 LRP3O75074 770 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 MTRF1O75570 445 aaKnown RBP16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 CTRB1P17538 263 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 CTRB2Q6GPI1 263 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 FAM122CQ6P4D5 195 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 OR4A4PQ8NGN8 299 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 C2orf50Q96LR7 162 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 IMMP1LQ96LU5 166 aa16.68■□□□□ 0.26
LYSMD4-202ENST00000344791 TLNRD1Q9H1K6 362 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms