RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 EBAG9O00559 213 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ENTPD6O75354 484 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
HMGN3-202ENST00000344726 NRASP01111 189 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 KRT8P05787 483 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 LIPFP07098 398 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 CCL1P22362 96 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ISL1P61371 349 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 BAMBIQ13145 260 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 IKZF1Q13422 519 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 TMED1Q13445 227 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ANGPTL6Q8NI99 470 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
HMGN3-202ENST00000344726 AQP3Q92482 292 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 ITFG2Q969R8 447 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 WDFY2Q96P53 400 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 SLC29A1Q99808 456 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 S100A14Q9HCY8 104 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 GPR173Q9NS66 373 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 DNAJB11Q9UBS4 358 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 RPUSD1Q9UJJ7 312 aaKnown RBP11.91□□□□□ -0.5
HMGN3-202ENST00000344726 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
HMGN3-202ENST00000344726 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 J3QRE1 110 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 TOX4O94842 621 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 HKR1P10072 659 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 GLRA1P23415 457 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 SNRPGP62308 76 aaKnown RBP11.9□□□□□ -0.5
HMGN3-202ENST00000344726 ARF6P62330 175 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 DGUOKQ16854 277 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 TP53I3Q53FA7 332 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 CLVS2Q5SYC1 327 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 HAGHLQ6PII5 290 aaPredicted RBP11.9□□□□□ -0.5
HMGN3-202ENST00000344726 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
HMGN3-202ENST00000344726 SLC36A1Q7Z2H8 476 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 PRSS35Q8N3Z0 413 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 PNLDC1Q8NA58 520 aaKnown RBP11.9□□□□□ -0.5
HMGN3-202ENST00000344726 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 RFKQ969G6 155 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 ZNF488Q96MN9 340 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 IMPAD1Q9NX62 359 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 NLKQ9UBE8 527 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 ORC6Q9Y5N6 252 aa11.9□□□□□ -0.5
HMGN3-202ENST00000344726 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 PQLC2LA1A4F0 135 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 OR2AT4A6NND4 320 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 NDUFB3O43676 98 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 SYNGR1O43759 233 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 SULT1C4O75897 302 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 ECDO95905 644 aaPredicted RBP11.89□□□□□ -0.51
HMGN3-202ENST00000344726 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
HMGN3-202ENST00000344726 GABRB1P18505 474 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 ATP6V1E1P36543 226 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 KIR3DL2P43630 455 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 MTNR1AP48039 350 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 OCLNQ16625 522 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 GPR157Q5UAW9 335 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 METTL11BQ5VVY1 283 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 CNTD2Q9H8S5 307 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 ACOXLQ9NUZ1 547 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 ZNF222Q9UK12 451 aa11.89□□□□□ -0.51
HMGN3-202ENST00000344726 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGN3-202ENST00000344726 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 CLDN34H7C241 214 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 DLGAP1O14490 977 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 SIGLEC5O15389 551 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
HMGN3-202ENST00000344726 PSG2P11465 335 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 HAAOP46952 286 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 PQLC1Q8N2U9 271 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 LHX4Q969G2 390 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
HMGN3-202ENST00000344726 GNG8Q9UK08 70 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 MAB21L2Q9Y586 359 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 PCDHGB1Q9Y5G3 927 aa11.88□□□□□ -0.51
HMGN3-202ENST00000344726 PKD1L1Q8TDX9 2849 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 J3QT63 122 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-202ENST00000344726 SYT7O43581 403 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 PGA5P0DJD9 388 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 GABRA2P47869 451 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 DLX1P56177 255 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 IL13RA1P78552 427 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms