RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.64
SNRNP48-201ENST00000342415 LMO7DNF2Z398 122 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 CXCL13O43927 109 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 HPNP05981 417 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 GGNBP1Q5YKI7 109 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 RHBDD1Q8TEB9 315 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 GFI1Q99684 422 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 KLHDC3Q9BQ90 382 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 ARF1P84077 181 aaKnown RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 PTCRAQ6ISU1 281 aaPredicted RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 RPS19BP1Q86WX3 136 aaKnown RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 PIK3IP1Q96FE7 263 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 MMP26Q9NRE1 261 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 TCF20Q9UGU0 1960 aaKnown RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 MTCL1Q9Y4B5 1905 aaKnown RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 CDRT15L2A8MXV6 281 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 TNFSF11O14788 317 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 HMGB3O15347 200 aaKnown RBP11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 DHHO43323 396 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 WDR1O75083 606 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 HPP00738 406 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 NRASP01111 189 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 OR5AC1P0C628 307 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 CEBPEQ15744 281 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 BATFQ16520 125 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 OR5AS1Q8N127 324 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 SSX3Q99909 188 aa11.02□□□□□ -0.65
SNRNP48-201ENST00000342415 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 J3QRE1 110 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 TTRP02766 147 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 TGIF1Q15583 401 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 ADIRFQ15847 76 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 PRSS54Q6PEW0 395 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 FSCN3Q9NQT6 498 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 A0A1W2PPH5 198 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 OR2M5A3KFT3 312 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 RAB27BO00194 218 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 TUSC2O75896 110 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 TBPP20226 339 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 FCARP24071 287 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 LIMK1P53667 647 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 THNSL2Q86YJ6 484 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 MRPL24Q96A35 216 aaKnown RBP11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 SOX7Q9BT81 388 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 IFT22Q9H7X7 185 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 PISDQ9UG56 409 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 FAM24AA6NFZ4 105 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 E5RGE8 158 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 IAPPP10997 89 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 SSR4P51571 173 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 SHBQ15464 509 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 ISXQ2M1V0 245 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 OR2A2Q6IF42 318 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 LINC00696Q6ZRV3 163 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 NOXO1Q8NFA2 376 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 FAM234AQ9H0X4 552 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 GAB2Q9UQC2 676 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 NSG2Q9Y328 171 aa11.01□□□□□ -0.65
SNRNP48-201ENST00000342415 IGHV1OR21-1A0A087WYE8 117 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 A0A087WZY1 265 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 A0A1W2PR80 420 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CCL2P13500 99 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 ICAM2P13598 275 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 FPR2P25090 351 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 FOLR3P41439 243 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 MLF1P58340 268 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 FOXK1P85037 733 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF266Q14584 549 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 HPSE2Q8WWQ2 592 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 EDAQ92838 391 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 GPHA2Q96T91 129 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 TCEAL7Q9BRU2 100 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CRISPLD2Q9H0B8 497 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CRLF2Q9HC73 371 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 TRAPPC2LQ9UL33 140 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 RCL1Q9Y2P8 373 aaKnown RBP11□□□□□ -0.65
SNRNP48-201ENST00000342415 SLCO1B1Q9Y6L6 691 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 DIDO1Q9BTC0 2240 aaKnown RBP11□□□□□ -0.65
SNRNP48-201ENST00000342415 LOC102725191A0A1B0GVB3 256 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 ANKUB1A6NFN9 424 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 TAAR5O14804 337 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 TMEM127O75204 238 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CLDN1O95832 211 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 PTAFRP25105 342 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 EIF1P41567 113 aaKnown RBP11□□□□□ -0.65
SNRNP48-201ENST00000342415 RAB5CP51148 216 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 SCAND1P57086 179 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF239Q16600 458 aaKnown RBP11□□□□□ -0.65
SNRNP48-201ENST00000342415 IGSF11Q5DX21 431 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 JMJD6Q6NYC1 403 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms