RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DYNLRB1Q9NP97 96 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC35C2Q9NQQ7 365 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FKBP14Q9NWM8 211 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PSMC3IPQ9P2W1 217 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TRMT6Q9UJA5 497 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC45A2Q9UMX9 530 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 AURKCQ9UQB9 309 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TIMM10BQ9Y5J6 103 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IGHV1OR15-1A0A075B7D0 117 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TRAV3A0A0B4J244 114 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 A0A0G2JPF8 293 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 NBDYA0A0U1RRE5 68 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PQLC2LA1A4F0 135 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LEUTXA8MZ59 168 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HNRNPCL3B7ZW38 293 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 J3QR06 171 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 M0R3G1 203 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PSMD9O00233 223 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DFFAO00273 331 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KPNA4O00629 521 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SCDO00767 359 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 AP3D1O14617 1153 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DENRO43583 198 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SULT1B1O43704 296 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ORC5O43913 435 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SNX3O60493 162 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 NDUFS3O75489 264 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 NDUFB2O95178 105 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KRT6AP02538 564 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KRT6BP04259 564 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GYPBP06028 91 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SNRPAP09012 282 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HIST1H2AGP0C0S8 130 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HNRNPCL4P0DMR1 293 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LYNX1P0DP58 116 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CDH1P12830 882 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CRISP2P16562 243 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RAB6AP20340 208 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HIST1H2ADP20671 130 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PRPS1L1P21108 318 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MAOAP21397 527 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 EEF1B2P24534 225 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RPL4P36578 427 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF83P51522 516 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RAP1GDS1P52306 607 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ERVFC1-1P60608 527 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SSTP61278 116 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 BTG2P78543 158 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DHODHQ02127 395 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IL24Q13007 206 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MRPL28Q13084 256 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IL13RA2Q14627 380 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF146Q15072 292 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF678Q5SXM1 525 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ARMC4Q5T2S8 1044 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TPTE2P1Q5T6R2 138 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LIPMQ5VYY2 423 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LIN54Q6MZP7 749 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ERICH5Q6P6B1 374 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FAM151BQ6UXP7 276 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PRSS48Q7RTY5 328 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PID1Q7Z2X4 250 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 WDFY1Q8IWB7 410 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC22A24Q8N4F4 322 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF114Q8NC26 417 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR8J3Q8NGG0 315 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR4C15Q8NGM1 316 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNRF2Q8NHG8 242 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LKAAEAR1Q8TD35 194 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 EEF1AKMT1Q8WVE0 214 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM37Q8WXS4 190 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 APOPT1Q96IL0 206 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HIST1H2AHQ96KK5 128 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 C20orf173Q96LM9 149 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF570Q96NI8 536 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SPIN2AQ99865 258 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 HIST1H2AJQ99878 128 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SH3GL1Q99961 368 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SPIN2BQ9BPZ2 258 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MAPKAP1Q9BPZ7 522 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FUZQ9BT04 418 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 H2AFJQ9BTM1 129 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CADM1Q9BY67 442 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ALX4Q9H161 411 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TXNIPQ9H3M7 391 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MAGIXQ9H6Y5 334 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 C10orf88Q9H8K7 445 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GPATCH2Q9NW75 528 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CACFD1Q9UGQ2 172 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 PRSS50Q9UI38 385 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 UTP11Q9Y3A2 253 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 FREM3P0C091 2139 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 A0A0J9YXV3 536 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PRAMEF27A3QJZ7 478 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ANKDD1BA6NHY2 528 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CLDN24A6NM45 220 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TRPC5OSA6NMA1 111 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 NPIPB5A8MRT5 1133 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 H7C0C1 242 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR7A17O14581 309 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms