RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TUBAL3A6NHL2 446 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 FAM166BA8MTA8 275 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 TEX46H3BTG2 121 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ITGA3P26006 1051 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 AGTR1P30556 359 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 TSPO2Q5TGU0 170 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 LINC00696Q6ZRV3 163 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 HDHD3Q9BSH5 251 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 WDR13Q9H1Z4 485 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 TNFSF18Q9UNG2 199 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ARID1AO14497 2285 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 IGKV1D-8A0A087WSZ0 117 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SERPINE3A8MV23 424 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 TAS2R31P59538 309 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SLC9A3R2Q15599 337 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM128Q5BJH2 165 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM164Q5U3C3 297 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 AADACL3Q5VUY0 350 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM65Q6PI78 240 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SULF2Q8IWU5 870 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 CCDC54Q8NEL0 328 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 FAM173AQ9BQD7 235 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNHIT1O43257 154 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 KCNAB3O43448 404 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SCO1O75880 301 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 CRYZL1O95825 349 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SERPINF1P36955 418 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF92Q03936 586 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 OR1C1Q15619 314 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 KRTAP27-1Q3LI81 207 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 DCAF10Q5QP82 559 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 Q96M66 194 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 PLEKHJ1Q9NW61 149 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 IL17BQ9UHF5 180 aa12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 NOSIPQ9Y314 301 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-201ENST00000331433 hCG_1807616A0A1W2PRN6 198 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 DBX1A6NMT0 343 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 DHRS7CA6NNS2 312 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 SLC25A4P12235 298 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 MAGEA5P43359 124 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 LHX2P50458 406 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 TAF9Q16594 264 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 RGS7BPQ6MZT1 257 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 CLEC18BQ6UXF7 455 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 LHFPL1Q86WI0 220 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 VRK1Q99986 396 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 SLC6A15Q9H2J7 730 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 PPA2Q9H2U2 334 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 R4GN57 208 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 DOCK7Q96N67 2140 aa12.92□□□□□ -0.34
CLCNKA-201ENST00000331433 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CEACAM18A8MTB9 384 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 MRPL33O75394 65 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 MT-CO3P00414 261 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SERPINA5P05154 406 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 FPR2P25090 351 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 TAS2R46P59540 309 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 RSU1Q15404 277 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 PABPC1L2AQ5JQF8 200 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SIGIRRQ6IA17 410 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 JMJD6Q6NYC1 403 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 OR5AP2Q8NGF4 316 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 GPR87Q9BY21 358 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 REG4Q9BYZ8 158 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SDHAF2Q9NX18 166 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 OSGIN2Q9Y236 505 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 A0A0D9SG52 128 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 MSTNO14793 375 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SHOXO15266 292 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 NRASP01111 189 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 GLRA1P23415 457 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CALCRP30988 508 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CLDN18P56856 261 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 PCBD1P61457 104 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SUPT4H1P63272 117 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 FAM3AP98173 230 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 PDSS1Q5T2R2 415 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms