RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 A0A1W2PR80 420 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 VSIG8P0DPA2 414 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 KIR3DL2P43630 455 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 TMEM18Q96B42 140 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 V9GYS6 101 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 PCNTO95613 3336 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 A8MXK9 166 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 NGFRP08138 427 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MMP7P09237 267 aaPredicted RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MYF5P13349 255 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 JMJD6Q6NYC1 403 aaPredicted RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 OR2AE1Q8NHA4 323 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 OR6C1Q96RD1 312 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 DNAJB11Q9UBS4 358 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 ROS1P08922 2347 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 GJE1A6NN92 205 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 TGOLN2O43493 480 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 SPINK2P20155 84 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 GDF1P27539 372 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 SKP2Q13309 424 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 KIAA0895LQ68EN5 471 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 KISS1RQ969F8 398 aaPredicted RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 ALX4Q9H161 411 aaPredicted RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 TDRD6O60522 2096 aaKnown RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
EPHB3-201ENST00000330394 HFEQ30201 348 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
EPHB3-201ENST00000330394 NRASP01111 189 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 CXCL10P02778 98 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 FGF7P21781 194 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 BMP5P22003 454 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 CARD18P57730 90 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 RAB31Q13636 194 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF345Q14585 488 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF141Q15928 474 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 TFAP2EQ6VUC0 442 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 DGAT2L6Q6ZPD8 337 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 FAM103A1Q9BTL3 118 aaKnown RBP12.5□□□□□ -0.41
EPHB3-201ENST00000330394 HEXA-AS1Q9H8Q6 139 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 MOB1AQ9H8S9 216 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF320A2RRD8 509 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 CLDN34H7C241 214 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 CDC14BO60729 498 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 PNPP00491 289 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 NTF3P20783 257 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 DBX2Q6ZNG2 339 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 LANCL3Q6ZV70 420 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 TMEM68Q96MH6 324 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 VSTM2LQ96N03 204 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 SLX1AQ9BQ83 275 aa12.5□□□□□ -0.41
EPHB3-201ENST00000330394 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 UBE2G2P60604 165 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 ERVK-16P61578 105 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 PNLIPRP3Q17RR3 467 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 MAML2Q8IZL2 1156 aaPredicted RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 OR5AS1Q8N127 324 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 OR2C3Q8N628 320 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 RHOVQ96L33 236 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 RPP25Q9BUL9 199 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 FTCDNL1E5RQL4 147 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 DVL1O14640 695 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 GREM1O60565 184 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 CELA2BP08218 269 aaPredicted RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 TNFRSF4P43489 277 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 UBE2NP61088 152 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 ECH1Q13011 328 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 ATG4DQ86TL0 474 aaPredicted RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 APOBEC4Q8WW27 367 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 OR2M5A3KFT3 312 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 MFNGO00587 321 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 PLRG1O43660 514 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 HLA-DOBP13765 273 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 KITLGP21583 273 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 APLNRP35414 380 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 SLC25A28Q96A46 364 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 NMES1Q9C002 83 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
EPHB3-201ENST00000330394 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
EPHB3-201ENST00000330394 A0A087WV48 116 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 A0A1B0GX78 115 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 LMX1BO60663 402 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 SLC25A4P12235 298 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 TCN2P20062 427 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms