RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PNPP00491 289 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 RPS4XP62701 263 aaKnown RBP13.57□□□□□ -0.24
VARS2-201ENST00000321897 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 NRIP2Q9BQI9 281 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 NPDC1Q9NQX5 325 aaPredicted RBP13.57□□□□□ -0.24
VARS2-201ENST00000321897 B3GALT5Q9Y2C3 310 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 H3BP45 60 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 C1QL1O75973 258 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 CRHP06850 196 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 CCL4P13236 92 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 ZNF2Q9BSG1 426 aaPredicted RBP13.57□□□□□ -0.24
VARS2-201ENST00000321897 OR14J1Q9UGF5 321 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 R4GMQ9 66 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 A0A0G2JK05 382 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 RNF224P0DH78 156 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 CARD18P57730 90 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 OR2B11Q5JQS5 317 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 CST9LP1Q5W188 147 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 SKA3Q8IX90 412 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 TMEM229BQ8NBD8 167 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 S1PR5Q9H228 398 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 FBXL17Q9UF56 701 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 TNFSF18Q9UNG2 199 aa13.57□□□□□ -0.24
VARS2-201ENST00000321897 MRPL33O75394 65 aaKnown RBP13.56□□□□□ -0.24
VARS2-201ENST00000321897 CCL2P13500 99 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 RAB4BP61018 213 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 CNEP1R1Q8N9A8 125 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 TERB2Q8NHR7 220 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 SEH1LQ96EE3 360 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 SOSTQ9BQB4 213 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 CNTD2Q9H8S5 307 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 PCOLCE2Q9UKZ9 415 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 A0A087X0M5 115 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 A0A1B0GX30 115 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 H2AFB1P0C5Y9 115 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 FAM157BP0CG42 384 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 EGR3Q06889 387 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 MPPED2Q15777 294 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 HLA-BQ31612 363 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 IL34Q6ZMJ4 242 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 NAT6Q93015 286 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 KISS1RQ969F8 398 aaPredicted RBP13.56□□□□□ -0.24
VARS2-201ENST00000321897 SDSLQ96GA7 329 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
VARS2-201ENST00000321897 PLXND1Q9Y4D7 1925 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 OR56B1Q8NGI3 324 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 SLC39A7Q92504 469 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
VARS2-201ENST00000321897 GDF15Q99988 308 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 AKIRIN1Q9H9L7 192 aaPredicted RBP13.56□□□□□ -0.24
VARS2-201ENST00000321897 GSN-AS1Q9NRJ2 163 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 AK3Q9UIJ7 227 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 SH3BGRL2Q9UJC5 107 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 NLRC5Q86WI3 1866 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 ZNF407Q9C0G0 2248 aa13.56□□□□□ -0.24
VARS2-201ENST00000321897 OR5H15A6NDH6 313 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 CST7O76096 145 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 RPS2P15880 293 aaKnown RBP13.55□□□□□ -0.24
VARS2-201ENST00000321897 APOBEC1P41238 236 aaKnown RBP13.55□□□□□ -0.24
VARS2-201ENST00000321897 PCK2Q16822 640 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 CADP27708 2225 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 ALG1L2C9J202 215 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 ACTL6AO96019 429 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 LINC00271P0C7V0 271 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 RAB5AP20339 215 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
VARS2-201ENST00000321897 MGAT2Q10469 447 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 FUT7Q11130 342 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 TMEM128Q5BJH2 165 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 PABPC1L2AQ5JQF8 200 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 ZNF600Q6ZNG1 722 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 SMRP1Q8NCR6 262 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 C2orf50Q96LR7 162 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 PADI1Q9ULC6 663 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 A0A1B0GV90 55 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 M0R135 149 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
VARS2-201ENST00000321897 HAAOP46952 286 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 INSM1Q01101 510 aaPredicted RBP13.55□□□□□ -0.24
VARS2-201ENST00000321897 PLXDC2Q6UX71 529 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 VOPP1Q96AW1 172 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 ABCA4P78363 2273 aa13.55□□□□□ -0.24
VARS2-201ENST00000321897 CEBPZOSA8MTT3 80 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ADRA2CP18825 462 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 OR3A4PP47883 348 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 EXD3Q8N9H8 876 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SLC26A10Q8NG04 563 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 SEC11CQ9BY50 192 aa13.54□□□□□ -0.24
VARS2-201ENST00000321897 WIPI1Q5MNZ9 446 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms