RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 ALKBH3Q96Q83 286 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 SLCO1B1Q9Y6L6 691 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 A0A087WZY1 265 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 OR2A4O95047 310 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 THBS4P35443 961 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 FOXL2P58012 376 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 GUCA2BQ16661 112 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 GGNBP1Q5YKI7 109 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 RDH5Q92781 318 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 CTHRC1Q96CG8 243 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 GPX7Q96SL4 187 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 DFFBO76075 338 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 ZNF205O95201 554 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 OR8G2PQ6IF36 304 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 ZNF485Q8NCK3 441 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 SLC26A10Q8NG04 563 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 WNT2BQ93097 391 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 SPACA9Q96E40 222 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 C19orf12Q9NSK7 152 aa11.8□□□□□ -0.52
DDX54-201ENST00000306014 RCL1Q9Y2P8 373 aaKnown RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 TP53BP1Q12888 1972 aaPredicted RBP11.8□□□□□ -0.52
DDX54-201ENST00000306014 CTRB1P17538 263 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 RAB4BP61018 213 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
DDX54-201ENST00000306014 C4orf17Q53FE4 359 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 CTRB2Q6GPI1 263 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
DDX54-201ENST00000306014 ISOC2Q96AB3 205 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 MMP24Q9Y5R2 645 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 VWA8A3KMH1 1905 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 KIR2DS1A0A191URI9 304 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 A0A1W2PPV4 95 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 H3BMH7 237 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 CXCL13O43927 109 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 TXNDC12O95881 172 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 KIR2DS4P43632 304 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 MGAT2Q10469 447 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 ZNF345Q14585 488 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 KIR2DS1Q14954 304 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 SPEM1Q8N4L4 309 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 IGKV1D-42A0A075B6H8 117 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 SERPINA7P05543 415 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 GLAP06280 429 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 DAOP14920 347 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 SLC16A13Q7RTY0 426 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 MRPL41Q8IXM3 137 aaKnown RBP11.79□□□□□ -0.52
DDX54-201ENST00000306014 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 NMES1Q9C002 83 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 BOKQ9UMX3 212 aaPredicted RBP11.79□□□□□ -0.52
DDX54-201ENST00000306014 GAB2Q9UQC2 676 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 TIMM10BQ9Y5J6 103 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 IGHV1OR21-1A0A087WYE8 117 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 TRAV20A0A0B4J274 112 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.79□□□□□ -0.52
DDX54-201ENST00000306014 IGHV3-64DA0A0J9YX35 117 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 LOC105371267A0A1B0GV96 52 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 ZNF814B7Z6K7 855 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 RAB27BO00194 218 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 TNFSF11O14788 317 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 MSMO1Q15800 293 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 LTC4SQ16873 150 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 TGIF2Q9GZN2 237 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 DNAJB11Q9UBS4 358 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 KCNK7Q9Y2U2 307 aa11.79□□□□□ -0.52
DDX54-201ENST00000306014 PTPRDP23468 1912 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 OR5H15A6NDH6 313 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 LMX1BO60663 402 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 HOXD4P09016 255 aaPredicted RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 BCKDHBP21953 392 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 MEOX2P50222 304 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 MMP16P51512 607 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 RBMS3Q6XE24 437 aaKnown RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 LHFPL2Q6ZUX7 228 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 THNSL2Q86YJ6 484 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 A0A096LPE4 126 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 A0A1W2PPZ6 126 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 ADAM11O75078 769 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 DHRS3O75911 302 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 CRYBA1P05813 215 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 C2orf68Q2NKX9 166 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 TSPO2Q5TGU0 170 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 C9orf40Q8IXQ3 194 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
DDX54-201ENST00000306014 RNF133Q8WVZ7 376 aa11.78□□□□□ -0.52
DDX54-201ENST00000306014 PISDQ9UG56 409 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms