RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IKZF1Q13422 519 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 PDCD1Q15116 288 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 TMEM42Q69YG0 159 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 DUX4L9Q6RFH8 374 aaPredicted RBP21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 Q6ZSR3 168 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 FAM220AQ7Z4H9 259 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 OR14K1Q8NGZ2 314 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 AQP3Q92482 292 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 TMIGD2Q96BF3 282 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 DMRTB1Q96MA1 342 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 C9orf16Q9BUW7 83 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 CNTD2Q9H8S5 307 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 DUX4Q9UBX2 424 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 SLC22A13Q9Y226 551 aa21.87■■□□□ 1.09
CDKN2A-201ENST00000304494 SNTNA6NMZ2 147 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 CCL1P22362 96 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 IL13RA1P78552 427 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 ZIK1Q3SY52 487 aaPredicted RBP21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 HAGHLQ6PII5 290 aaPredicted RBP21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 BRD3OSQ6XYD6 125 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 ZNF788Q6ZQV5 615 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 CATSPERDQ86XM0 798 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 ZNF573Q86YE8 665 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 ANGPTL6Q8NI99 470 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 TBX15Q96SF7 602 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 SIRPDQ9H106 197 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 S100A14Q9HCY8 104 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 RASL12Q9NYN1 266 aa21.86■■□□□ 1.09
CDKN2A-201ENST00000304494 A0A1B0GVI7 797 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 OR2AT4A6NND4 320 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 ENTPD6O75354 484 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 AMY2BP19961 511 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 ACTC1P68032 377 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 ACTA1P68133 377 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 OCLNQ16625 522 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 DMRTC1Q5HYR2 192 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 CCDC54Q8NEL0 328 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 RORBQ92753 470 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 UBE2FQ969M7 185 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 SLC25A28Q96A46 364 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 PLEKHA1Q9HB21 404 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 KPTNQ9Y664 436 aa21.85■■□□□ 1.09
CDKN2A-201ENST00000304494 FBN3Q75N90 2809 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 E9PQ18 207 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 CLDN34H7C241 214 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 ARF6P62330 175 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 CDONQ4KMG0 1287 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 FGFRL1Q8N441 504 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 LY6G5BQ8NDX9 201 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 GATAD2BQ8WXI9 593 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 GAFA1Q96PS6 74 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 ADI1Q9BV57 179 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 GPR173Q9NS66 373 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 GNG8Q9UK08 70 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 POLDIP2Q9Y2S7 368 aa21.84■■□□□ 1.09
CDKN2A-201ENST00000304494 SIGLEC5O15389 551 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 SYT7O43581 403 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 ACAA1P09110 424 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 HAAOP46952 286 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 ZNF85Q03923 595 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 ODF4Q2M2E3 257 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 KCTD20Q7Z5Y7 419 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 CMTM4Q8IZR5 234 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 POC1AQ8NBT0 407 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 RNFT2Q96EX2 444 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 C1orf147Q96MC9 270 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 DUX5Q96PT3 197 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 DCTN5Q9BTE1 182 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 SLC25A10Q9UBX3 287 aaPredicted RBP21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 PCDHGB1Q9Y5G3 927 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 GMPPBQ9Y5P6 360 aa21.83■■□□□ 1.09
CDKN2A-201ENST00000304494 CENPVL3A0A0U1RRI6 287 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 J3QT63 122 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 RNASE1P07998 156 aaKnown RBP21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 GABRA2P47869 451 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 ISL1P61371 349 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 SMIM21Q3B7S5 101 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 PQLC1Q8N2U9 271 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 KIR3DL3Q8N743 410 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 H1FXQ92522 213 aaKnown RBP21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 ZDHHC16Q969W1 377 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 MBOAT4Q96T53 435 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 PRDM13Q9H4Q3 707 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 ACOXLQ9NUZ1 547 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 ONECUT1Q9UBC0 465 aa21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 SOX21Q9Y651 276 aaPredicted RBP21.82■■□□□ 1.08
CDKN2A-201ENST00000304494 DAPL1A0PJW8 107 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 PQLC2LA1A4F0 135 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 ANKRD61A6NGH8 418 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 A6NIN4 97 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 MPZL2O60487 215 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 UBCP0CG48 685 aaKnown RBP21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 PSG2P11465 335 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 SELLP14151 372 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 CAV3P56539 151 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 SLC9A3R2Q15599 337 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 DGUOKQ16854 277 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 DEFB112Q30KQ8 113 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 TP53I3Q53FA7 332 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 ZBTB49Q6ZSB9 765 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms