RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZNF440Q8IYI8 595 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 STT3BQ8TCJ2 826 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 LMF2Q9BU23 707 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 NXF5Q9H1B4 397 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ONECUT2O95948 504 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 GUCA1AP43080 201 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 DLK1P80370 383 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 OR52N5Q8NH56 324 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 RAB39BQ96DA2 213 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 RAB18Q9NP72 206 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 F5H5K5 113 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 FCGR3AP08637 254 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF25P17030 456 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 HTR5AP47898 357 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF880Q6PDB4 577 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 PIGTQ969N2 578 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 NMNAT2Q9BZQ4 307 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 SDHAF3Q9NRP4 125 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 TRANK1O15050 2925 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 SLC25A1P53007 311 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 RPS23P62266 143 aaKnown RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 FAM57BQ71RH2 274 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 C20orf196Q8IYI0 205 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 CA13Q8N1Q1 262 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 PARP11Q9NR21 331 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 PADI1Q9ULC6 663 aa13.17□□□□□ -0.3
SPIDR-201ENST00000297423 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
SPIDR-201ENST00000297423 F8VVB4 439 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 F8VWA3 439 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 TAAR5O14804 337 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 UTS2O95399 124 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SLC35E2P0CK97 266 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 PPA1Q15181 289 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 UBE2V2Q15819 145 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SEBOXQ9HB31 216 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-201ENST00000297423 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 H3BP45 60 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 EPHA1P21709 976 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 ARRDC1Q8N5I2 433 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 ABHD14AQ9BUJ0 271 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 TMEM100Q9NV29 134 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 ARGFXA6NJG6 315 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 HCRTR1O43613 425 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 PGA4P0DJD7 388 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SNCAP37840 140 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 RPL27P61353 136 aaKnown RBP13.16□□□□□ -0.3
SPIDR-201ENST00000297423 MRPS34P82930 218 aaKnown RBP13.16□□□□□ -0.3
SPIDR-201ENST00000297423 MGAT2Q10469 447 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-201ENST00000297423 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 LRFN5Q96NI6 719 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 VN1R1Q9GZP7 353 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 SLC17A5Q9NRA2 495 aa13.16□□□□□ -0.3
SPIDR-201ENST00000297423 CD1AP06126 327 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 HOXA5P20719 270 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 SLC26A5P58743 744 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 TOMM20Q15388 145 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 LCN15Q6UWW0 184 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 BTNL8Q6UX41 500 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 LMX1AQ8TE12 382 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 HDHD3Q9BSH5 251 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-201ENST00000297423 SOX7Q9BT81 388 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 TIMM10BQ9Y5J6 103 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 A0A1W2PR80 420 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 RRADP55042 308 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 UNC119Q13432 240 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 ADAMTS18Q8TE60 1221 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 TMEM37Q8WXS4 190 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 SCARF2Q96GP6 870 aaPredicted RBP13.15□□□□□ -0.3
SPIDR-201ENST00000297423 R4GMQ9 66 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 CD5P06127 495 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF708P17019 499 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 RPS4Y1P22090 263 aaKnown RBP13.15□□□□□ -0.3
SPIDR-201ENST00000297423 CD38P28907 300 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 PRTGQ2VWP7 1150 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 SLC26A10Q8NG04 563 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 NEK7Q8TDX7 302 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
SPIDR-201ENST00000297423 WNT16Q9UBV4 365 aa13.15□□□□□ -0.3
SPIDR-201ENST00000297423 KIR2DS5A0A0G2JLQ3 304 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms