RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 SLC26A10Q8NG04 563 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SDF2Q99470 211 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 GPR87Q9BY21 358 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CER1O95813 267 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 TTRP02766 147 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 EPXP11678 715 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 PAX5Q02548 391 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SLC16A13Q7RTY0 426 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 OR5M1Q8NGP8 315 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 OR2G2Q8NGZ5 317 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SIRPB1O00241 398 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 UPK1AO00322 258 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SELENBP1Q13228 472 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 BTNL3Q6UXE8 466 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 OR10C1Q96KK4 312 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 ADGRL4Q9HBW9 690 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 GPR84Q9NQS5 396 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 ARHGAP21Q5T5U3 1957 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 M0R2Z0 102 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 AKR7A3O95154 331 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 HEXAP06865 529 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 TOMM34Q15785 309 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 COA3Q9Y2R0 106 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 DUSP18Q8NEJ0 188 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 PYCARD-AS1I3L0S3 204 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 TBXA2RP21731 343 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 RPL27P61353 136 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SMIM21Q3B7S5 101 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 MGAMO43451 1857 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 ADGRG7Q96K78 797 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 TLCD2A6NGC4 264 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SLC2A10O95528 541 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 IGHA2P01877 340 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CD99P14209 185 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 S100A4P26447 101 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CD200P41217 278 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 DCDP81605 110 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 TRMT12Q53H54 448 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 HS3ST3A1Q9Y663 406 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 MEIKINA0A087WXM9 373 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TRBV5-3A0A0A0MS03 114 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 NEURL1O76050 574 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 CDKN3Q16667 212 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 OR10AD1Q8NGE0 317 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF764Q96H86 408 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 CYB5R1Q9UHQ9 305 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 GCSHP23434 173 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 SIRT6Q8N6T7 355 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 OR4S1Q8NGB4 309 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TEX101Q9BY14 249 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 CD207Q9UJ71 328 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TCF21O43680 179 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 GZMKP49863 264 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 DIO1P49895 249 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 EGR3Q06889 387 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 MARCH3Q86UD3 253 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TXNIPQ9H3M7 391 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 IL21Q9HBE4 155 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 LANCL2Q9NS86 450 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 UFC1Q9Y3C8 167 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 OR51B4Q9Y5P0 310 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 PLRG1O43660 514 aaKnown RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM81Q6P7N7 255 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 A4GNTQ9UNA3 340 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 GLDNQ6ZMI3 551 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 EIF4E3Q8N5X7 224 aaKnown RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 BCORP1Q8N888 145 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 TIMD4Q96H15 378 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 ZC3HAV1LQ96H79 300 aaKnown RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF749O43361 778 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 SCRG1O75711 98 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 Q96M85 177 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 FAM221AA4D161 298 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF737O75373 536 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 PCBP3P57721 371 aaKnown RBP8.88□□□□□ -0.99
COL6A3-201ENST00000295550 C17orf78Q8N4C9 275 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 NAT6Q93015 286 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 MSL2Q9HCI7 577 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 SPINK4O60575 86 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 CST7O76096 145 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 NT5CQ8TCD5 201 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 RDH5Q92781 318 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 SLC5A6Q9Y289 635 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 WSB1Q9Y6I7 421 aa8.88□□□□□ -0.99
COL6A3-201ENST00000295550 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SHHQ15465 462 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 MBNL1Q9NR56 388 aaKnown RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 LSM2Q9Y333 95 aaKnown RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 OPN1MWP04001 364 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 OPN1MW2P0DN77 364 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 OPN1MW3P0DN78 364 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 CDK5R1Q15078 307 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM241Q24JQ0 296 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms