RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 IFT22Q9H7X7 185 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 SMCO4Q9NRQ5 59 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 PLA2G2EQ9NZK7 142 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 MYOTQ9UBF9 498 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 ATPIF1Q9UII2 106 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 MCTS1Q9ULC4 181 aaKnown RBP16.82■□□□□ 0.28
LSM12-201ENST00000293406 BRWD1Q9NSI6 2320 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 RALGAPA1Q6GYQ0 2036 aa16.82■□□□□ 0.28
LSM12-201ENST00000293406 AQP7P3A6NL99 342 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 DHRS7CA6NNS2 312 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 IFNA21P01568 189 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 IFNA4P05014 189 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 MEOX2P50222 304 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 CLDN17P56750 224 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 TMEM33P57088 247 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 B2MP61769 119 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 PPA1Q15181 289 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 RABEPKQ7Z6M1 372 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 CADM4Q8NFZ8 388 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 PRRX2Q99811 253 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 SMIM3Q9BZL3 60 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 PLEKHJ1Q9NW61 149 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 TUBD1Q9UJT1 453 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 LSM5Q9Y4Y9 91 aaKnown RBP16.81■□□□□ 0.28
LSM12-201ENST00000293406 CA11O75493 328 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 ZFAND5O76080 213 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 CTSDP07339 412 aaPredicted RBP16.81■□□□□ 0.28
LSM12-201ENST00000293406 OR8U9P0C7N5 309 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 GABRR1P24046 479 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 LSM6P62312 80 aaKnown RBP16.81■□□□□ 0.28
LSM12-201ENST00000293406 AKIRIN2Q53H80 203 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 OPN5Q6U736 354 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 OR8U1Q8NH10 309 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 PP6455Q8WZ26 134 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 HAS2Q92819 552 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 PIGTQ969N2 578 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 AKR1E2Q96JD6 320 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 USB1Q9BQ65 265 aaKnown RBP16.81■□□□□ 0.28
LSM12-201ENST00000293406 CHST5Q9GZS9 411 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 V9GYS6 101 aa16.81■□□□□ 0.28
LSM12-201ENST00000293406 A0A0U1RQV5 110 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 FAM157AC9JC47 383 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 RRP8O43159 456 aaKnown RBP16.8■□□□□ 0.28
LSM12-201ENST00000293406 MSR1P21757 451 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 GGNBP1Q5YKI7 109 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 GJC3Q8NFK1 279 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 SLC25A43Q8WUT9 341 aaPredicted RBP16.8■□□□□ 0.28
LSM12-201ENST00000293406 PIGLQ9Y2B2 252 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 HDGFL3Q9Y3E1 203 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 SPAG17Q6Q759 2223 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 CRYM-AS1A6NIL9 109 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 APOC1P02654 83 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 RAB5BP61020 215 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 SLC25A45Q8N413 288 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 MRPL24Q96A35 216 aaKnown RBP16.8■□□□□ 0.28
LSM12-201ENST00000293406 HDHD3Q9BSH5 251 aaPredicted RBP16.8■□□□□ 0.28
LSM12-201ENST00000293406 RNF122Q9H9V4 155 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 AMDHD2Q9Y303 409 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 B3GALT1Q9Y5Z6 326 aa16.8■□□□□ 0.28
LSM12-201ENST00000293406 TIAF1O95411 115 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 SCGB1D2O95969 90 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 FAM3AP98173 230 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 ZNF239Q16600 458 aaKnown RBP16.79■□□□□ 0.28
LSM12-201ENST00000293406 LCN10Q6JVE6 187 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 OR9K2Q8NGE7 335 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 CHRDQ9H2X0 955 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 CACFD1Q9UGQ2 172 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 PADI1Q9ULC6 663 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 KPTNQ9Y664 436 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 LOC102725191A0A1B0GVB3 256 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 OR5H15A6NDH6 313 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 NR2C1P13056 603 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 FOLR2P14207 255 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 CSNK1A1P48729 337 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 ZNF133P52736 654 aaPredicted RBP16.79■□□□□ 0.28
LSM12-201ENST00000293406 SLC35A1P78382 337 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 CPEB2Q7Z5Q1 589 aaKnown RBP16.79■□□□□ 0.28
LSM12-201ENST00000293406 DTX1Q86Y01 620 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 SLC22A8Q8TCC7 542 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 SECTM1Q8WVN6 248 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 C14orf79Q96F83 325 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 NELFAQ9H3P2 528 aa16.79■□□□□ 0.28
LSM12-201ENST00000293406 PAX6P26367 422 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 PPT1P50897 306 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 S100A12P80511 92 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 ETV3LQ6ZN32 361 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 C15orf54Q8N8G6 183 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 WDSUB1Q8N9V3 476 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 UBAC2Q8NBM4 344 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 LYPD6BQ8NI32 183 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 CRB3Q9BUF7 120 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 PARP12Q9H0J9 701 aaKnown RBP16.78■□□□□ 0.28
LSM12-201ENST00000293406 PLEKHA2Q9HB19 425 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 FAM212BQ9NTI7 297 aaPredicted RBP16.78■□□□□ 0.28
LSM12-201ENST00000293406 ANXA10Q9UJ72 324 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 TSPAN15O95858 294 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 TMEM225BP0DP42 221 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 EIF1P41567 113 aaKnown RBP16.78■□□□□ 0.28
LSM12-201ENST00000293406 ENDOGQ14249 297 aaKnown RBP16.78■□□□□ 0.28
LSM12-201ENST00000293406 HABP2Q14520 560 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms