RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 FAM96BQ9Y3D0 163 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 TIMM10BQ9Y5J6 103 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 USP34Q70CQ2 3546 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 SHOXO15266 292 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 CBR3O75828 277 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 TXNDC12O95881 172 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 SERPINA7P05543 415 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 PTGER4P35408 488 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 BAXQ07812 192 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 TMEM267Q0VDI3 215 aaPredicted RBP4.24□□□□□ -1.73
UBR1-201ENST00000290650 PABPC1L2AQ5JQF8 200 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 LSMEM1Q8N8F7 131 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 SCCPDHQ8NBX0 429 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 OR10AD1Q8NGE0 317 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 OR56B2PQ8NGI1 322 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 NPAS1Q99742 590 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 CNTNAP3Q9BZ76 1288 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 ZNF768Q9H5H4 540 aaKnown RBP4.24□□□□□ -1.73
UBR1-201ENST00000290650 NTMQ9P121 344 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 A0A1B0GUH1 482 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 RAMP1O60894 148 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 RECKO95980 971 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 GLULP15104 373 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 PSMB6P28072 239 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 SLC25A1P53007 311 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 AANATQ16613 207 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 TBC1D28Q2M2D7 210 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 LGALSLQ3ZCW2 172 aaPredicted RBP4.24□□□□□ -1.73
UBR1-201ENST00000290650 ATPAF1Q5TC12 328 aaPredicted RBP4.24□□□□□ -1.73
UBR1-201ENST00000290650 LCN15Q6UWW0 184 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 FER1L6-AS2Q96M78 137 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 ZNF488Q96MN9 340 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 SLC25A32Q9H2D1 315 aa4.24□□□□□ -1.73
UBR1-201ENST00000290650 RALYQ9UKM9 306 aaKnown RBP4.24□□□□□ -1.73
UBR1-201ENST00000290650 KIAA1671Q9BY89 1806 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 MED13LQ71F56 2210 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 HOXC4P09017 264 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 PTGFRP43088 359 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 RHBDD2Q6NTF9 364 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 H3F3CQ6NXT2 135 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SLC51BQ86UW2 128 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 TUSC5Q8IXB3 177 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 C9orf62Q8N4C0 152 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR11G2Q8NGC1 345 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 EXOSC3Q9NQT5 275 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 ZNF275Q9NSD4 429 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 DSPPQ9NZW4 1301 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 MEIKINA0A087WXM9 373 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR4C45A6NMZ5 311 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 LEUTXA8MZ59 168 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 GEMIN2O14893 280 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 OGG1O15527 345 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 F12P00748 615 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 BGLAPP02818 100 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 NDUFB7P17568 137 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ALDH3B1P43353 468 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 RPL23AP62750 156 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 HIKESHIQ53FT3 197 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 DCAF12L2Q5VW00 463 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 LYG2Q86SG7 212 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 TMEM104Q8NE00 496 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR1F12Q8NHA8 337 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR2V1Q8NHB1 315 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SCARB1Q8WTV0 552 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SLC25A43Q8WUT9 341 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 TCTEX1D2Q8WW35 142 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 RGP1Q92546 391 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 RBMXL1Q96E39 390 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 HAO2Q9NYQ3 351 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SPAARA0A1B0GVQ0 90 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SPRY3O43610 288 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 NDUFB6O95139 128 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR2B8PP59922 312 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 HES3Q5TGS1 186 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 TIGD3Q6B0B8 471 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 EXD3Q8N9H8 876 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR13C8Q8NGS7 320 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR2G3Q8NGZ4 309 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OR6S1Q8NH40 331 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ZNF501Q96CX3 271 aaPredicted RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 MUCL1Q96DR8 90 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 PGLYRP3Q96LB9 341 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ADAT1Q9BUB4 502 aaKnown RBP4.23□□□□□ -1.73
UBR1-201ENST00000290650 PBDC1Q9BVG4 233 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 EVA1AQ9H8M9 152 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 SERTAD4Q9NUC0 356 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 ARHGAP21Q5T5U3 1957 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 C1orf196B1AJZ1 125 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 D6RAR5 112 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OPN1MWP04001 364 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OPN1MW2P0DN77 364 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 OPN1MW3P0DN78 364 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 NAT2P11245 290 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 MEOX1P50221 254 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 C4orf17Q53FE4 359 aa4.23□□□□□ -1.73
UBR1-201ENST00000290650 FHL5Q5TD97 284 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms