RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CNIH1O95406 144 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 OR5AC1P0C628 307 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 COX5AP20674 150 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 GALP22466 123 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 DMKNQ6E0U4 476 aaPredicted RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 RNF165Q6ZSG1 346 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF383Q8NA42 475 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 SLC35E1Q96K37 410 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 CTDSP1Q9GZU7 261 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 MSL2Q9HCI7 577 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 RAB18Q9NP72 206 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 FRRS1LQ9P0K9 344 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 CD160O95971 181 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 THBS4P35443 961 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 NOVA1P51513 510 aaKnown RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 OR10AC1Q8NH08 325 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 EXTL1Q92935 676 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 TRIB1Q96RU8 372 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 NMES1Q9C002 83 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF205O95201 554 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 F12P00748 615 aaPredicted RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 IRF3Q14653 427 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ARHGEF39Q8N4T4 335 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ADAD2Q8NCV1 583 aaKnown RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 OR5C1Q8NGR4 320 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 OR6S1Q8NH40 331 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 NEU3Q9UQ49 428 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF891A8MT65 544 aaPredicted RBP13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 NKX2-2O95096 273 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 TSPO2Q5TGU0 170 aa13.7□□□□□ -0.22
SHROOM4-201ENST00000289292 SERPINE3A8MV23 424 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 IQCJQ1A5X6 159 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 FAM122AQ96E09 287 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 KLRC4-KLRK1H3BQV0 150 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 CELA2BP08218 269 aaPredicted RBP13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 SPP1P10451 314 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 ERVS71-1P61550 626 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 AWAT1Q58HT5 328 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 PPP1CBP62140 327 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 PLA1AQ53H76 456 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM65Q6PI78 240 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 CBLN3Q6UW01 205 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 RABEPKQ7Z6M1 372 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 IL22RA2Q969J5 263 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 CCDC74BQ96LY2 380 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 GPA33Q99795 319 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 MIOXQ9UGB7 285 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 LINC00862A6NCI5 91 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 AP4M1O00189 453 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 DHHO43323 396 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 PLA2G2FQ9BZM2 168 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 UQCC1Q9NVA1 299 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 A0A087X0M5 115 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 A0A1B0GX30 115 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 RRADP55042 308 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM240Q5SV17 173 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 PPIL1Q9Y3C6 166 aa13.69□□□□□ -0.22
SHROOM4-201ENST00000289292 KCNJ3P48549 501 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 GZMMP51124 257 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 ERVFC1-1P60608 527 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 HSD17B13Q7Z5P4 300 aaPredicted RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CLDN23Q96B33 292 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 OR5H15A6NDH6 313 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 DEFB108AA8MXU0 73 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CD200P41217 278 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM218A2RU14 115 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 HMSDA8MTL9 139 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 VAMP5O95183 116 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 EPPINO95925 133 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 SHHQ15465 462 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 FFAR4Q5NUL3 377 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 C6orf15Q6UXA7 325 aaPredicted RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 ANKRD33Q7Z3H0 272 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 SLC35B3Q9H1N7 401 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 M0R1B8 84 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 GSTZ1O43708 216 aaPredicted RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 TOX4O94842 621 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 KRASP01116 189 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CCL2P13500 99 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CTLA4P16410 223 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 PTGFRP43088 359 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 RAG2P55895 527 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 PPIAP62937 165 aaKnown RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 KLF9Q13886 244 aaPredicted RBP13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM91Q6ZNR0 172 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 SLC17A5Q9NRA2 495 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 FLRT3Q9NZU0 649 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms