RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ZNF841Q6ZN19 808 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 ZNF671Q8TAW3 534 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 TRMT10AQ8TBZ6 339 aaKnown RBP20.94■□□□□ 0.94
PDF-201ENST00000288022 WDR13Q9H1Z4 485 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 FGF20Q9NP95 211 aaPredicted RBP20.94■□□□□ 0.94
PDF-201ENST00000288022 SNTG1Q9NSN8 517 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 AUP1Q9Y679 476 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 JMJD1CQ15652 2540 aa20.94■□□□□ 0.94
PDF-201ENST00000288022 TNFRSF13BO14836 293 aaPredicted RBP20.93■□□□□ 0.94
PDF-201ENST00000288022 GNAO1P09471 354 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 HAAOP46952 286 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 CCR9P51686 369 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 ALKBH1Q13686 389 aaKnown RBP20.93■□□□□ 0.94
PDF-201ENST00000288022 C1QL2Q7Z5L3 287 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 ZNF573Q86YE8 665 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 ZNF676Q8N7Q3 588 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 OR5T2Q8NGG2 359 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 NPRL2Q8WTW4 380 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 RAB40AQ8WXH6 277 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 AQP3Q92482 292 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 C12orf43Q96C57 262 aaKnown RBP20.93■□□□□ 0.94
PDF-201ENST00000288022 CCL13Q99616 98 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 RASSF4Q9H2L5 321 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 OPN4Q9UHM6 478 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 SLC7A11Q9UPY5 501 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 HSPE1-MOB4S4R3N1 261 aa20.93■□□□□ 0.94
PDF-201ENST00000288022 IGHV2-70DA0A0C4DH43 119 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 FAM230AA0A1W2PPH8 454 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 PQLC2LA1A4F0 135 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 H0YHG0 523 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 GATBO75879 557 aaKnown RBP20.92■□□□□ 0.94
PDF-201ENST00000288022 SERPINA3P01011 423 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 GLRA1P23415 457 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 DCKP27707 260 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 GBX2P52951 348 aaPredicted RBP20.92■□□□□ 0.94
PDF-201ENST00000288022 SCGB2A2Q13296 93 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 NANPQ8TBE9 248 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 ZNF649Q9BS31 505 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 SMURF1Q9HCE7 757 aa20.92■□□□□ 0.94
PDF-201ENST00000288022 ISG15P05161 165 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 LIMS3P0CW19 117 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 LIMS4P0CW20 117 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 ZNF20P17024 532 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 MRPL28Q13084 256 aaKnown RBP20.91■□□□□ 0.94
PDF-201ENST00000288022 SLC36A1Q7Z2H8 476 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 EGFL6Q8IUX8 553 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 TMIGD2Q96BF3 282 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 C10orf35Q96D05 121 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 NUDT16L1Q9BRJ7 211 aaKnown RBP20.91■□□□□ 0.94
PDF-201ENST00000288022 JAM3Q9BX67 310 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 CHST5Q9GZS9 411 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 OCEL1Q9H607 264 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 KAAG1Q9UBP8 84 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 HHLA2Q9UM44 414 aa20.91■□□□□ 0.94
PDF-201ENST00000288022 NKX6-3A6NJ46 265 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 OR4C45A6NMZ5 311 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 J3QT63 122 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 DVL1O14640 695 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 MYL12AP19105 171 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 ETV1P50549 477 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 PAX2Q02962 417 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 UBE2V2Q15819 145 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 ARMCX4Q5H9R4 360 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 CD276Q5ZPR3 534 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 STUMQ69YW2 141 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 OR13C3Q8NGS6 347 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 PP6455Q8WZ26 134 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 ST8SIA4Q92187 359 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 NLKQ9UBE8 527 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 POLDIP2Q9Y2S7 368 aa20.9■□□□□ 0.94
PDF-201ENST00000288022 E9PI62 339 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 ENSAO43768 121 aaKnown RBP20.89■□□□□ 0.93
PDF-201ENST00000288022 CNN3Q15417 329 aaKnown RBP20.89■□□□□ 0.93
PDF-201ENST00000288022 TMPRSS11AQ6ZMR5 421 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 FAM216BQ8N7L0 139 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 NRG4Q8WWG1 115 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 FGGYQ96C11 551 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 ADAT3Q96EY9 351 aaPredicted RBP20.89■□□□□ 0.93
PDF-201ENST00000288022 COMMD4Q9H0A8 199 aa20.89■□□□□ 0.93
PDF-201ENST00000288022 DIMT1Q9UNQ2 313 aaKnown RBP20.89■□□□□ 0.93
PDF-201ENST00000288022 EXOSC1Q9Y3B2 195 aaKnown RBP20.89■□□□□ 0.93
PDF-201ENST00000288022 KIR2DS1A0A191URI9 304 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 A0A1B0GW55 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 C22orf46C9J442 243 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 SYNGR1O43759 233 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 CCDC159P0C7I6 412 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L2P0CJ85 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L3P0CJ86 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L4P0CJ87 422 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L5P0CJ88 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L6P0CJ89 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L7P0CJ90 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 EPHA1P21709 976 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 PAX8Q06710 450 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 IKZF1Q13422 519 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 MED21Q13503 144 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4L9Q6RFH8 374 aaPredicted RBP20.88■□□□□ 0.93
PDF-201ENST00000288022 ANGPTL5Q86XS5 388 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 POC1AQ8NBT0 407 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 OR51A4Q8NGJ6 313 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms