RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 CNTD2Q9H8S5 307 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 TAF9BQ9HBM6 251 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 FAM96BQ9Y3D0 163 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 IGLV3-12A0A075B6K2 115 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 CA11O75493 328 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 MED6O75586 246 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 FARS2O95363 451 aaKnown RBP9.09□□□□□ -0.95
UPF3B-201ENST00000276201 UTS2O95399 124 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 GPANK1O95872 356 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 CD63P08962 238 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 FAM87AP0C7U9 286 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 OTX2P32243 289 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 GLO1Q04760 184 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ZP4Q12836 540 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 CLEC18BQ6UXF7 455 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SLC35D2Q76EJ3 337 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 PPP1R32Q7Z5V6 425 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 GVQW1Q8N7I0 195 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 PHOSPHO1Q8TCT1 267 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ST7LQ8TDW4 575 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 MESP1Q9BRJ9 268 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 OSGIN2Q9Y236 505 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 FRG2CA6NGY1 282 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 AP4M1O00189 453 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 SLC16A7O60669 478 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 NSA2O95478 260 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 HLA-DQA2P01906 255 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CSN2P05814 226 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CTLA4P16410 223 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 SUPT4H1P63272 117 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF117Q03924 483 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 LY6DQ14210 128 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 SSPNQ14714 243 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 ELAVL1Q15717 326 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 HIST2H3AQ71DI3 136 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 SLC16A13Q7RTY0 426 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 PRSS58Q8IYP2 241 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 UBAC2Q8NBM4 344 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 SLC26A10Q8NG04 563 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 STT3BQ8TCJ2 826 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 PPP1R14AQ96A00 147 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CLCC1Q96S66 551 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 NIT2Q9NQR4 276 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 NXT1Q9UKK6 140 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 H0YIG0 161 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 HTR3BO95264 441 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 HPGDP15428 266 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 RPS2P15880 293 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CXCR1P25024 350 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 OR52W1Q6IF63 320 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CBLN3Q6UW01 205 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 CHST4Q8NCG5 386 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF563Q8TA94 476 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 INTS12Q96CB8 462 aaKnown RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
UPF3B-201ENST00000276201 EMC9Q9Y3B6 208 aa9.08□□□□□ -0.96
UPF3B-201ENST00000276201 ARGFXA6NJG6 315 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF729A6NN14 1252 aaPredicted RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 C9JQL5 133 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PLPP3O14495 311 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 RAB5AP20339 215 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 CPT2P23786 658 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 THBS4P35443 961 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 SNCAP37840 140 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 RAB5CP51148 216 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 DCAF7P61962 342 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 CHAF1BQ13112 559 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 TMPPEQ6ZT21 453 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 SLC29A4Q7RTT9 530 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 EMG1Q92979 244 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 TGIF2Q9GZN2 237 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 LPAR5Q9H1C0 372 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 MOB1AQ9H8S9 216 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 ZMAT3Q9HA38 289 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PLEKHA2Q9HB19 425 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 FAM206AQ9NX38 181 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 MIOXQ9UGB7 285 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 TLN1Q9Y490 2541 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 TRAV20A0A0B4J274 112 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 C7orf77A4D0Y5 90 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 SMAD9O15198 467 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PMP2P02689 132 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 OR8U8P0C7N1 319 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 HIST1H1DP16402 221 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 PGCP20142 388 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 ACKR3P25106 362 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 POLR2HP52434 150 aaKnown RBP9.07□□□□□ -0.96
UPF3B-201ENST00000276201 EFNA3P52797 238 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 SLC26A5P58743 744 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 TAS2R46P59540 309 aa9.07□□□□□ -0.96
UPF3B-201ENST00000276201 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms