RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PLXDC1Q8IUK5 500 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 POC1AQ8NBT0 407 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 PECRQ9BY49 303 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 C8orf33Q9H7E9 229 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-201ENST00000263856 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 COA4Q9NYJ1 87 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 SHANK1Q9Y566 2161 aa10.9□□□□□ -0.67
CHMP3-201ENST00000263856 TAS2R46P59540 309 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 VAX1Q5SQQ9 334 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 GGNBP1Q5YKI7 109 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 SUMF1Q8NBK3 374 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 SLC38A9Q8NBW4 561 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 C1orf147Q96MC9 270 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 FAAP24Q9BTP7 215 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 SMCO4Q9NRQ5 59 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 MCTS1Q9ULC4 181 aaKnown RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 RCL1Q9Y2P8 373 aaKnown RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 IGHV1OR15-9A0A0B4J2B8 117 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 ZNHIT1O43257 154 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF44P15621 663 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 OMGP23515 440 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 NOVA1P51513 510 aaKnown RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 C5orf46Q6UWT4 87 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 DOK3Q7L591 496 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 PPP1R3BQ86XI6 285 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 SLAMF9Q96A28 289 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 RAB33BQ9H082 229 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 CHRDQ9H2X0 955 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 TIAF1O95411 115 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 PGA4P0DJD7 388 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF17P17021 662 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 PIGPP57054 158 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 CPEB2Q7Z5Q1 589 aaKnown RBP10.89□□□□□ -0.67
CHMP3-201ENST00000263856 FAM24BQ8N5W8 94 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 OR9K2Q8NGE7 335 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 MVB12AQ96EY5 273 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 LMAN1LQ9HAT1 526 aa10.89□□□□□ -0.67
CHMP3-201ENST00000263856 A0A1W2PPE3 182 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 ACAA1P09110 424 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 ZP4Q12836 540 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PNLIPRP3Q17RR3 467 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 EIF2S3LQ2VIR3 472 aaKnown RBP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 EMG1Q92979 244 aaKnown RBP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PRRX2Q99811 253 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 CNTNAP3Q9BZ76 1288 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 TRBV6-7A0A0A0MS04 114 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PMS2P1A4D2B8 440 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 NQO2P16083 231 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 MTCP1P56278 107 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 HABP2Q14520 560 aaPredicted RBP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 CLINT1Q14677 625 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 OR6C1Q96RD1 312 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 SH3BGRL3Q9H299 93 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PADI1Q9ULC6 663 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 OSGIN2Q9Y236 505 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHMP3-201ENST00000263856 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
CHMP3-201ENST00000263856 LMO7DNF2Z398 122 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 MPZP25189 248 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 B2MP61769 119 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 DTX1Q86Y01 620 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 MISPQ8IVT2 679 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 ZNF441Q8N8Z8 693 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 ADAMTS9Q9P2N4 1935 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 COLCA2A8K830 154 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 LINC00587B1AMM8 73 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-201ENST00000263856 CST4P01036 141 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 OR5AC1P0C628 307 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 PATE4P0C8F1 98 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 OR5H8P0DN80 308 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 PTAFRP25105 342 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 SPEM2Q0P670 501 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 PLPPR5Q32ZL2 321 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-201ENST00000263856 LYZL2Q7Z4W2 148 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 ANKRD37Q7Z713 158 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-201ENST00000263856 FAM213BQ8TBF2 198 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 OIT3Q8WWZ8 545 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 SMIM8Q96KF7 97 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 TNFSF12O43508 249 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 SPINK2P20155 84 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 CD27P26842 260 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 SULT1A2P50226 295 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 RSU1Q15404 277 aa10.87□□□□□ -0.67
CHMP3-201ENST00000263856 RAET1LQ5VY80 246 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms