RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 TRAV34A0A0B4J273 112 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 A4D1N5 150 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 RIIAD1A6NNX1 92 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 CLDN25C9JDP6 229 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 AIREO43918 545 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 LMX1BO60663 402 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 B3GALNT1O75752 331 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GABARAPO95166 117 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GSTT2P0CG29 244 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GSTT2BP0CG30 244 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 CCL2P13500 99 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ZNF250P15622 560 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ZNF3P17036 446 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
AFP-201ENST00000226359 S100A1P23297 94 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GIFP27352 417 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ZNF81P51508 661 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 BLVRAP53004 296 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 SLURP1P55000 103 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 PSG4Q00888 419 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 RAB40BQ12829 278 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ECH1Q13011 328 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 DGUOKQ16854 277 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 HFEQ30201 348 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ALKBH6Q3KRA9 238 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 TIMM50Q3ZCQ8 353 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 RNLSQ5VYX0 342 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 THOC7Q6I9Y2 204 aaKnown RBP4.83□□□□□ -1.64
AFP-201ENST00000226359 RAB12Q6IQ22 244 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ZNF774Q6NX45 483 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 MOB3CQ70IA8 216 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 FAM122BQ7Z309 247 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ZNF584Q8IVC4 421 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GID4Q8IVV7 300 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 WDFY1Q8IWB7 410 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 PROKR2Q8NFJ6 384 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 GJC3Q8NFK1 279 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 OR52I1Q8NGK6 324 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 OR2T4Q8NH00 348 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 FGFBP3Q8TAT2 258 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 CHPT1Q8WUD6 406 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 RAB1CQ92928 201 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 SPTSSAQ969W0 71 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 LGALS12Q96DT0 336 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 MGLLQ99685 303 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 COQ7Q99807 217 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 NEURL2Q9BR09 285 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 BPESC1Q9GZL8 116 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 WNT5BQ9H1J7 359 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 FGF20Q9NP95 211 aaPredicted RBP4.83□□□□□ -1.64
AFP-201ENST00000226359 SNTG1Q9NSN8 517 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 IL20RAQ9UHF4 553 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 DIMT1Q9UNQ2 313 aaKnown RBP4.83□□□□□ -1.64
AFP-201ENST00000226359 GRIP1Q9Y3R0 1128 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 ARID1AO14497 2285 aa4.83□□□□□ -1.64
AFP-201ENST00000226359 USF3Q68DE3 2245 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 ROS1P08922 2347 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 MTORP42345 2549 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 FREM1Q5H8C1 2179 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 IGKV1D-43A0A0B4J1Z2 117 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 TMEM129A0AVI4 362 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 FAM90A8PA6NJQ4 464 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 PRR23D1E9PI22 279 aaPredicted RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 CCRL2O00421 344 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 ARPC3O15145 178 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 TRIAP1O43715 76 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 CDC14BO60729 498 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 CRLF1O75462 422 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 LY6HO94772 140 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 IGHV3-13P01766 116 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 FAM90A13PP0C7W8 464 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 FAM90A24PP0C7X0 464 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 PRR23D2P0DMB1 279 aaPredicted RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 CTLA4P16410 223 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 ZNF182P17025 639 aaPredicted RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 HTR1FP30939 366 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 MC5RP33032 325 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 SRP14P37108 136 aaKnown RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 F2RL1P55085 397 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 TMEM33P57088 247 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 VBP1P61758 197 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 RPS7P62081 194 aaKnown RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 ENDOGQ14249 297 aaKnown RBP4.82□□□□□ -1.64
AFP-201ENST00000226359 SPCS2Q15005 226 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 TAF13Q15543 124 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 CTF1Q16619 201 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 KLHL12Q53G59 568 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 IGSF11Q5DX21 431 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 SPATA46Q5T0L3 261 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 AADACL4Q5VUY2 407 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 NXNL2Q5VZ03 156 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 SLC16A12Q6ZSM3 486 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 GLCCI1Q86VQ1 547 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 LNX2Q8N448 690 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 NANOGP1Q8N7R0 232 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 OR4K13Q8NH42 304 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 OR51F2Q8NH61 342 aa4.82□□□□□ -1.64
AFP-201ENST00000226359 OR1F12Q8NHA8 337 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms