RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Rbmxl1Q91VM5 388 aaKnown RBP10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 PrkraQ9WTX2 313 aaKnown RBP10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm14418A2ARR6 358 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm14322A2AW66 358 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Scgb1b29D2XZ31 93 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr914E9PW59 316 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Scgb1b20E9PWZ2 93 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 P10404 641 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Selenbp1P17563 472 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Il10rbQ61190 349 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 St6gal2Q76K27 524 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 AI987944Q7TPX5 406 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1497Q8VG11 314 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 CrygnQ8VHL5 183 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 HcrtO55241 130 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ccr2P51683 373 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Adamts8P57110 905 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tfb2mQ3TL26 396 aaKnown RBP10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Il20raQ6PHB0 546 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Chchd4Q8VEA4 139 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Jam3Q9D8B7 310 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 SclyQ9JLI6 432 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1438-ps1A0A140LHS9 319 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pif1Q80SX8 650 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Seh1lQ8R2U0 360 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr502Q8VG09 314 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Odf4Q8VI88 290 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 PnpoQ91XF0 261 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Arpc1bQ9WV32 372 aaKnown RBP10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ighv15-2A0A0A6YX72 118 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm13420A0A140LJJ2 248 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr282A1L1B4 308 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1406E9Q8X1 310 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 NdnP25233 325 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hoxd1Q01822 328 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Nanos1Q80WY3 267 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fbxw14Q8C2Y5 466 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr582Q8VGV9 319 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr584Q8VGW0 319 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Impa2Q91UZ5 290 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1248A0A1L1SSZ5 307 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cldn34dA2AGU5 210 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 HbaP01942 142 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Adra1aP97718 466 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ctf1Q60753 203 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Adam12Q61824 903 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 SelplgQ62170 397 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Flrt1Q6RKD8 674 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr658Q8VGV5 323 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Med18Q9CZ82 208 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Emc7Q9EP72 241 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Alx3O70137 343 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr173Q6PI62 373 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 A730061H03RikQ8BGD2 154 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc35e1Q8CD26 409 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 A730046J19RikA0A1B0GSN8 89 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mfsd4b5E9PYY6 479 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm21721J3QMK7 227 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr50O88495 591 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fam109aQ8BH49 266 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr24Q8VFM9 313 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 AI182371A2AS37 356 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1055A2AVX9 346 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 P01641 117 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dnase1P49183 284 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ppp1cbP62141 327 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cd300lbQ3U497 209 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr187Q8VEX6 308 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr994Q8VF73 314 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Scgb1b27Q91WB5 92 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Q9CRW3 126 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Sun5Q9DA32 373 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Bbs10Q9DBI2 713 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Kcnd3Q9Z0V1 655 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Chst13D3Z6E3 336 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm45062E0CZ38 131 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rpl12P35979 165 aaKnown RBP10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 GalP47212 124 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fut7Q11131 389 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 TprkbQ8QZZ7 175 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm11214V9GX06 183 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fndc3c1Q6DFV6 1356 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr267A2AM35 313 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ltc4sQ60860 150 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Iglon5Q8HW98 336 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r183Q8K3N5 305 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc29a3Q99P65 475 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dpep3Q9DA79 493 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Q9DAD0 168 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Als2Q920R0 1651 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Sult2a3D3Z1W5 285 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 5430403G16RikD3Z5L4 667 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 4930522L14RikE9QAG4 666 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rab18P35293 206 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 TaglnP37804 201 aaKnown RBP10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Defb20Q30KP3 96 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Galnt2Q6PB93 570 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr963Q7TRA9 311 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cox14Q8BH51 57 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr152Q8BXS7 511 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms