RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Acer1Q8R4X1 273 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr460Q8VF31 314 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rpl7l1Q9D8M4 246 aaKnown RBP9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pdcd1lg2Q9WUL5 247 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Oc90Q9Z0L3 485 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Sbf2E9PXF8 1872 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm42791D3YYB5 209 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm43720E0CXM8 267 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r129E9QA94 307 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm8720K9J7F4 307 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 GbaP17439 515 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PmchP56942 165 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prss57Q14B24 284 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ttyh2Q3TH73 532 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Defb28Q3V2L0 89 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Alkal2Q80UG6 151 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prss50Q8BLH5 439 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Foxj3Q8BUR3 623 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc38a1Q8K2P7 485 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1284Q8VF29 311 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr60Q8VGL4 311 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 EdarQ9R187 448 aa9.31□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Trbv23A0A0A6YWQ1 115 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lilra6A0A0B4J1F3 663 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr587-ps1A0A1B0GSS1 159 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr110A2RT31 317 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr288E9Q1P2 318 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr568E9Q554 313 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm609E9Q573 300 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Il1bP10749 269 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 RelP15307 587 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fabp7P51880 132 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cnep1r1Q3UJ81 125 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfp933Q6PEE4 468 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr111Q7TRK1 317 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cpne4Q8BLR2 557 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 C1sbQ8CFG8 688 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Abhd6Q8R2Y0 336 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 MetrnlQ8VE43 311 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prss42Q8VIF2 335 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Otud1Q9CUB6 454 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr887Q9EQA6 309 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tas2r105Q9JKT4 300 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Usp36B1AQJ2 1098 aaKnown RBP9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mtnd4lP03903 98 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gcnt2P97402 401 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 B4galnt1Q09200 533 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 C1rlQ3UZ09 482 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Taf9bQ6NZA9 249 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr884Q7TRE1 309 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r72Q8K3N7 306 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 FuomQ8R2K1 153 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr281Q8VET6 311 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Bcdin3dQ91YP1 285 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cryzl1Q921W4 348 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Washc3Q9CR27 194 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 TsfmQ9CZR8 324 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr888Q9EQA5 314 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 GrinaQ9ESF4 345 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PrknQ9WVS6 464 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1082A0A1L1SUC9 313 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm3676D3Z236 184 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm21761J3QK00 171 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tbxa2rP30987 341 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hrh3P58406 445 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 CtdsplP58465 276 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prrc1Q3UPH1 443 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prl8a9Q9CQ58 241 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hint2Q9D0S9 163 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Marveld3Q9D956 376 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Med29Q9DB91 199 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfp53Q9Z117 652 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem156A0A1D5RLR8 321 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mtg2A2AFK4 405 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Znf551B2RUI1 696 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 H2-M1F7CXU4 344 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mas1P30554 324 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tfap2eQ6VUP9 442 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cxcl3Q6W5C0 100 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PhyhiplQ8BGT8 375 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ankrd46Q8BTZ5 228 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lsm10Q8QZX5 122 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Alg12Q8VDB2 486 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm9817Q9D2M0 144 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ntn4Q9JI33 628 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 SigirrQ9JLZ8 409 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mmp24Q9R0S2 618 aa9.3□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zdbf2Q5SS00 2493 aaKnown RBP9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 4930563M21RikA0A1L1SUT5 578 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1109A2AT96 312 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fbxw25F7C9P2 466 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 TectbO08524 329 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 St8sia2O35696 375 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Prss39O70169 367 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 P01629 112 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vipr2P41588 437 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 HccsP53702 272 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rnf133Q14B02 382 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 HgsnatQ3UDW8 656 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr10Q60883 311 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms