RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 HES7Q9BYE0 225 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ZNF703Q9H7S9 590 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-211ENST00000641213 TIMM10BQ9Y5J6 103 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 KNTC1P50748 2209 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 LINC01387J3KSC0 135 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 CCSO14618 274 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 RP2O75695 350 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 LCATP04180 440 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 RPA2P15927 270 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 AKR1C4P17516 323 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 HLA-GP17693 338 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 HTR5AP47898 357 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 LIN54Q6MZP7 749 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 GALNTL5Q7Z4T8 443 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 SULF2Q8IWU5 870 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 ADAMTS17Q8TE56 1095 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 OR2H1Q9GZK4 316 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 WNT5BQ9H1J7 359 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 CELA3AP09093 270 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 DCAF10Q5QP82 559 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 SKA3Q8IX90 412 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 ARRDC1Q8N5I2 433 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 TMEM45BQ96B21 275 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 PHB2Q99623 299 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 MFFQ9GZY8 342 aa14.88□□□□□ -0.03
PHGDH-211ENST00000641213 ELL3Q9HB65 397 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-211ENST00000641213 OR5H14A6NHG9 310 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 TUBAL3A6NHL2 446 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 HPNP05981 417 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 VAMP1P23763 118 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 LHX2P50458 406 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 PCBD1P61457 104 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 COMMD7Q86VX2 200 aa14.87□□□□□ -0.03
PHGDH-211ENST00000641213 AMY2BP19961 511 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 CPT2P23786 658 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ITGA3P26006 1051 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 MTCP1P56278 107 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 PRSS12P56730 875 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 SRYQ05066 204 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 FGL1Q08830 312 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 OR1C1Q15619 314 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 OR5H2Q8NGV7 314 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 CASTOR1Q8WTX7 329 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 SPSB1Q96BD6 273 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 SEC22AQ96IW7 307 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 PDCD10Q9BUL8 212 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ST6GALNAC5Q9BVH7 336 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 PLA2G3Q9NZ20 509 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 B4GALT7Q9UBV7 327 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 GPR132Q9UNW8 380 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 R4GN57 208 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ZNF407Q9C0G0 2248 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 CEACAM18A8MTB9 384 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 DUS4LO95620 317 aaKnown RBP14.86□□□□□ -0.03
PHGDH-211ENST00000641213 TMEM225BP0DP42 221 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 AVPR2P30518 371 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 CLDN18P56856 261 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 TAS2R31P59538 309 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 DHRS13Q6UX07 377 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ZNF546Q86UE3 836 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ABI3Q9P2A4 366 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 NOSIPQ9Y314 301 aaKnown RBP14.86□□□□□ -0.03
PHGDH-211ENST00000641213 DNAJC13O75165 2243 aa14.86□□□□□ -0.03
PHGDH-211ENST00000641213 ARHGAP21Q5T5U3 1957 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 IGKV1-27A0A075B6S5 117 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 IGKV3D-15A0A087WSY6 115 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 SERPINE3A8MV23 424 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 B3GALNT1O75752 331 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 IGHV3-9P01782 118 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 RRASP10301 218 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 ZNF24P17028 368 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 AGTR1P30556 359 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 NPY4RP50391 375 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 SNU13P55769 128 aaKnown RBP14.85□□□□□ -0.03
PHGDH-211ENST00000641213 TOR2AQ5JU69 321 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 TSPO2Q5TGU0 170 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 TMEM65Q6PI78 240 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 PLXDC2Q6UX71 529 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 ANGPTL6Q8NI99 470 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 Q96M66 194 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 KIF25Q9UIL4 384 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 FAM230AA0A1W2PPH8 454 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 FAM166BA8MTA8 275 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 MRPL33O75394 65 aaKnown RBP14.85□□□□□ -0.03
PHGDH-211ENST00000641213 MMP7P09237 267 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-211ENST00000641213 MPGP29372 298 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 MAGEA5P43359 124 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 AP2S1P53680 142 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-211ENST00000641213 ARL6IP1Q15041 203 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 CNN3Q15417 329 aaKnown RBP14.85□□□□□ -0.03
PHGDH-211ENST00000641213 LINC00696Q6ZRV3 163 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 KCTD9Q7L273 389 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 CSNK2A3Q8NEV1 391 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 OR13G1Q8NGZ3 307 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 MAFIPQ8WZ33 124 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 TTTY12Q9BZ98 90 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 C5orf66Q9H5L9 145 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 COMMD9Q9P000 198 aa14.85□□□□□ -0.03
PHGDH-211ENST00000641213 IL17BQ9UHF5 180 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms