RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 NRIP2Q9BQI9 281 aa13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 TMEM231Q9H6L2 316 aa13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 GSKIPQ9P0R6 139 aa13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RCC2Q9P258 522 aaKnown RBP13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 MEMO1Q9Y316 297 aa13.58□□□□□ -0.24
RHOXF1P3-203ENST00000640298 A0A0U1RQV5 110 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 TLX3O43711 291 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 F12P00748 615 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HEXAP06865 529 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SFTPDP35247 375 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 THBS4P35443 961 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 NPBWR1P48145 328 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 PPA1Q15181 289 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 TMEM176BQ3YBM2 270 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HRH4Q9H3N8 390 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 TAF9BQ9HBM6 251 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 COL6A3P12111 3177 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 STMND1H3BQB6 276 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HOXB5P09067 269 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 KLK2P20151 261 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 EIF1P41567 113 aaKnown RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ACY1Q03154 408 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 UBE2V2Q15819 145 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CHRFAM7AQ494W8 412 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RTL6Q6ICC9 239 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ZNF574Q6ZN55 896 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 WDSUB1Q8N9V3 476 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 MAFIPQ8WZ33 124 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 LIN37Q96GY3 246 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SHDQ96IW2 340 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 WNT16Q9UBV4 365 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 V9GYS6 101 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 LRP3O75074 770 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 DHRS3O75911 302 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 DKK1O94907 266 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HKR1P10072 659 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 NR2C1P13056 603 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RFC3P40938 356 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ECI1P42126 302 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RPL7L1Q6DKI1 246 aaKnown RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 Q6ZSR3 168 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FADS6Q8N9I5 356 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SLC22A8Q8TCC7 542 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ZNF160Q9HCG1 818 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 C1orf123Q9NWV4 160 aa13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 C14orf166Q9Y224 244 aaKnown RBP13.57□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ADAMTS9Q9P2N4 1935 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 KNG1P01042 644 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 IFNA2P01563 188 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CPT2P23786 658 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RAB13P51153 203 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 S100A10P60903 97 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SLC35A1P78382 337 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SHEQ5VZ18 495 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 GJC3Q8NFK1 279 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 HAS2Q92819 552 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SPACA9Q96E40 222 aaPredicted RBP13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 OR6C1Q96RD1 312 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CNTNAP3Q9BZ76 1288 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CHST5Q9GZS9 411 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RRP8O43159 456 aaKnown RBP13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ZNF708P17019 499 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SERPINA2P20848 420 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 MSR1P21757 451 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 PTGER4P35408 488 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 GUCA1AP43080 201 aaPredicted RBP13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 LPAR6P43657 344 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SULT1A2P50226 295 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CLDN17P56750 224 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RBM39Q14498 530 aaKnown RBP13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 NPRL2Q8WTW4 380 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 DECR2Q9NUI1 292 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 COLQQ9Y215 455 aaPredicted RBP13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FAM96BQ9Y3D0 163 aa13.56□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SCRG1O75711 98 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CST4P01036 141 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SFTPBP07988 381 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RBMXP38159 391 aaKnown RBP13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 H3F3AP84243 136 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 DTX1Q86Y01 620 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 C10orf35Q96D05 121 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 RASL10BQ96S79 203 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 SPSB2Q99619 263 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 F5H5K5 113 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 ONECUT2O95948 504 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 CD5P06127 495 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FCGR3AP08637 254 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FCGR2AP12318 317 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 FAHP16930 419 aa13.55□□□□□ -0.24
RHOXF1P3-203ENST00000640298 OTX1P32242 354 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms