RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SLC2A4RGQ9NR83 387 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 C14orf166Q9Y224 244 aaKnown RBP9.6□□□□□ -0.87
SNIP1-204ENST00000638725 TIMM10BQ9Y5J6 103 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 A0A1W2PNR3 127 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 A0A1W2PNV4 684 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF814B7Z6K7 855 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 STMND1H3BQB6 276 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 SGCEO43556 437 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 IFNA2P01563 188 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 IGLV3-19P01714 112 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 IGHG1P01857 330 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF44P15621 663 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 TMEM33P57088 247 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 CFHR1Q03591 330 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 KISS1Q15726 138 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 DOK3Q7L591 496 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
SNIP1-204ENST00000638725 MRPL24Q96A35 216 aaKnown RBP9.6□□□□□ -0.87
SNIP1-204ENST00000638725 C1orf123Q9NWV4 160 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 AMDHD2Q9Y303 409 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 ASXL3Q9C0F0 2248 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 A0A1W2PPE3 182 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 SHISA7A6NL88 538 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 FOXI3A8MTJ6 420 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 SCGB1D2O95969 90 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 SNRNP70P08621 437 aaKnown RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 CCL1P22362 96 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 C17orf82Q86X59 251 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 APCDD1LQ8NCL9 501 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 SEMA6DQ8NFY4 1073 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 OR14K1Q8NGZ2 314 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 FNDC9Q8TBE3 224 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 ISOC2Q96AB3 205 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 PRRX2Q99811 253 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 EGLN1Q9GZT9 426 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 KPTNQ9Y664 436 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 A0A1B0GX78 115 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 C5orf52A6NGY3 159 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 TRAF3IP2O43734 574 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 NME2P1O60361 137 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 RAMP1O60894 148 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 DEDDO75618 318 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF806P0C7X5 589 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 KLK2P20151 261 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 EIF2S3LQ2VIR3 472 aaKnown RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 AWAT1Q58HT5 328 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 MRPL38Q96DV4 380 aaKnown RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 BSCL2Q96G97 398 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 LYZL4Q96KX0 146 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF2Q9BSG1 426 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 HDHD3Q9BSH5 251 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 KLRF1Q9NZS2 232 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 PISDQ9UG56 409 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
SNIP1-204ENST00000638725 LAMA1P25391 3075 aa9.59□□□□□ -0.87
SNIP1-204ENST00000638725 JTBO76095 146 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 DAOP14920 347 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 EN2P19622 333 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 PAX6P26367 422 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 THBS4P35443 961 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SUMO3P55854 103 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SMAD4Q13485 552 aaKnown RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SHHQ15465 462 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 FAM189A2Q15884 450 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 C14orf28Q4W4Y0 310 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 MIDNQ504T8 468 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 GGNBP1Q5YKI7 109 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SLC25A47Q6Q0C1 308 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 C6orf201Q7Z4U5 140 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 OR9K2Q8NGE7 335 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SHDQ96IW2 340 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 IP6K3Q96PC2 410 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 C20orf24Q9BUV8 137 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 POMT1Q9Y6A1 747 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 ADAMTS9Q9P2N4 1935 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 MED12Q93074 2177 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 A6NLC8 198 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 DHRS7CA6NNS2 312 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 TSPAN15O95858 294 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 GAPDHP04406 335 aaKnown RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 S100A6P06703 90 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 QDPRP09417 244 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 CD38P28907 300 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 ZNF84P51523 738 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 ZNF41P51814 821 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SURF2Q15527 256 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 RSPO4Q2I0M5 234 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-204ENST00000638725 NSUN5P2Q63ZY6 315 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 OPN5Q6U736 354 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 SULF2Q8IWU5 870 aa9.58□□□□□ -0.88
SNIP1-204ENST00000638725 PLPP5Q8NEB5 264 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms