RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 TECTBQ96PL2 329 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 OR14A2Q96R54 314 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 PPP1R3CQ9UQK1 317 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 MTORP42345 2549 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 ITPR3Q14573 2671 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 TRBV5-7A0A0A0MS05 114 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 TMEM210A6NLX4 147 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 ZNF879B4DU55 563 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 RP2O75695 350 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 GRPP07492 148 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 CSF3P09919 207 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 SMIM18P0DKX4 95 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 ATF1P18846 271 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 PDLIM4P50479 330 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 GPM6AP51674 278 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 RPS25P62851 125 aaKnown RBP13.52□□□□□ -0.25
CLN6-216ENST00000636876 TRAM1Q15629 374 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 MPPED2Q15777 294 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 Q5PR19 223 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 SYT6Q5T7P8 510 aaPredicted RBP13.52□□□□□ -0.25
CLN6-216ENST00000636876 SHEQ5VZ18 495 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 MOGAT3Q86VF5 341 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 TGIF2LYQ8IUE0 185 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 SERPINA12Q8IW75 414 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 OR1M1Q8NGA1 313 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 OR5D14Q8NGL3 314 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 OR13C9Q8NGT0 318 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 THRSPQ92748 146 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 TMEM203Q969S6 136 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 ERGIC1Q969X5 290 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 ZCCHC4Q9H5U6 513 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 GCM1Q9NP62 436 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 SLC7A11Q9UPY5 501 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 SF3B6Q9Y3B4 125 aaKnown RBP13.52□□□□□ -0.25
CLN6-216ENST00000636876 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 TANC2Q9HCD6 1990 aa13.52□□□□□ -0.25
CLN6-216ENST00000636876 DYSFO75923 2080 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 IGKV1-9A0A0C4DH69 117 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 PQLC2LA1A4F0 135 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ZNF732B4DXR9 585 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 IFNL4K9M1U5 179 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 CCRL2O00421 344 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 PSMA1P25786 263 aaKnown RBP13.51□□□□□ -0.25
CLN6-216ENST00000636876 MAPK3P27361 379 aaPredicted RBP13.51□□□□□ -0.25
CLN6-216ENST00000636876 GABRA5P31644 462 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 GP2P55259 537 aaKnown RBP13.51□□□□□ -0.25
CLN6-216ENST00000636876 DSCR9P59020 149 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ZNF154Q13106 437 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 INSL4Q14641 139 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 CNN3Q15417 329 aaKnown RBP13.51□□□□□ -0.25
CLN6-216ENST00000636876 CARTPTQ16568 116 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 CLEC12BQ2HXU8 276 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ACSM3Q53FZ2 586 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 CLEC2AQ6UVW9 174 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 UNQ9370/PRO34162Q6UXP9 181 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 DNM1P46Q6ZS02 220 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 Q8TCH9 128 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 NPRL2Q8WTW4 380 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 DERL3Q96Q80 235 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 TLNRD1Q9H1K6 362 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 FN3KRPQ9HA64 309 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 UFSP2Q9NUQ7 469 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 NDUFB11Q9NX14 153 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 TAS2R4Q9NYW5 299 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 TREM2Q9NZC2 230 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
CLN6-216ENST00000636876 FAM230AA0A1W2PPH8 454 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 LRP5LA4QPB2 252 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 A6NLC8 198 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 SC5DO75845 299 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 ALX3O95076 343 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 JUNBP17275 347 aaPredicted RBP13.5□□□□□ -0.25
CLN6-216ENST00000636876 FSTP19883 344 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 PRKACBP22694 351 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 PMELP40967 661 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 FUT6P51993 359 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 HNRNPA0Q13151 305 aaKnown RBP13.5□□□□□ -0.25
CLN6-216ENST00000636876 HFEQ30201 348 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 DNAAF1Q8NEP3 725 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 ZNF420Q8TAQ5 688 aaPredicted RBP13.5□□□□□ -0.25
CLN6-216ENST00000636876 TRMT10AQ8TBZ6 339 aaKnown RBP13.5□□□□□ -0.25
CLN6-216ENST00000636876 FAM168AQ92567 244 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 CCL17Q92583 94 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 OR51I2Q9H344 312 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 NOX4Q9NPH5 578 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 C1orf123Q9NWV4 160 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 DCAF16Q9NXF7 216 aa13.5□□□□□ -0.25
CLN6-216ENST00000636876 PIN1P1O15428 100 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 SULT1B1O43704 296 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms