RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SPATA46Q5T0L3 261 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 LIPKQ5VXJ0 399 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 OR2T2Q6IF00 324 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 ZNF529Q6P280 563 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 UNQ9370/PRO34162Q6UXP9 181 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 ZDHHC23Q8IYP9 409 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 OR13F1Q8NGS4 319 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
UPF3B-205ENST00000636792 ELMOD3Q96FG2 381 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 FAM71F1Q96KD3 344 aaPredicted RBP5.72□□□□□ -1.49
UPF3B-205ENST00000636792 DERL3Q96Q80 235 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 HIST1H2AAQ96QV6 131 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 CCL19Q99731 98 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 MICU1Q9BPX6 476 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 PDCD1LG2Q9BQ51 273 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 ADAT1Q9BUB4 502 aaKnown RBP5.72□□□□□ -1.49
UPF3B-205ENST00000636792 UBTD1Q9HAC8 227 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 DLL4Q9NR61 685 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 ZNF701Q9NV72 531 aaPredicted RBP5.72□□□□□ -1.49
UPF3B-205ENST00000636792 NDUFA13Q9P0J0 144 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 TAAR3PQ9P1P4 343 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 DUSP13Q9UII6 198 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 SSR3Q9UNL2 185 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 SLC7A11Q9UPY5 501 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 PIGLQ9Y2B2 252 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 POLDIP2Q9Y2S7 368 aa5.72□□□□□ -1.49
UPF3B-205ENST00000636792 SF3B6Q9Y3B4 125 aaKnown RBP5.72□□□□□ -1.49
UPF3B-205ENST00000636792 COL12A1Q99715 3063 aa5.71□□□□□ -1.49
UPF3B-205ENST00000636792 TRAV1-2A0A0B4J238 106 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 A0A1W2PPR1 153 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TRIM64BA6NI03 449 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF701M0R085 212 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 GABRPO00591 440 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 PDCD5O14737 125 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 MAGEB3O15480 346 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ACAA1P09110 424 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 PRF1P14222 555 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 CD36P16671 472 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 FAHP16930 419 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 IGFBP3P17936 291 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 RAB3AP20336 220 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 CPT2P23786 658 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 MYL9P24844 172 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 MPZP25189 248 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TGFBR2P37173 567 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SCAND1P57086 179 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 GNG3P63215 75 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 PRDX4Q13162 271 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 OR8G1Q15617 311 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 MST1LQ2TV78 715 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ACSM3Q53FZ2 586 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 FAM76BQ5HYJ3 339 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 VHLLQ6RSH7 139 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 GPR141Q7Z602 305 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TPRA1Q86W33 373 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF573Q86YE8 665 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ANKRD13BQ86YJ7 626 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 Q8IYB0 196 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SAXO1Q8IYX7 474 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 C1orf87Q8N0U7 546 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 PNLDC1Q8NA58 520 aaKnown RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 OR8S1Q8NH09 359 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF420Q8TAQ5 688 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 Q8TCH9 128 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 RAB2BQ8WUD1 216 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 OR5P3Q8WZ94 311 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 RGP1Q92546 391 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 BORCS8Q96FH0 119 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 OR14A2Q96R54 314 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SYT3Q9BQG1 590 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 UQCC2Q9BRT2 126 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 MRI1Q9BV20 369 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TLNRD1Q9H1K6 362 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 CXXC4Q9H2H0 198 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 OR51B6Q9H340 312 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TPK1Q9H3S4 243 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 POFUT1Q9H488 388 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ZCCHC4Q9H5U6 513 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SAP30LQ9HAJ7 183 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TCF7L1Q9HCS4 588 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM138Q9NPI0 162 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SNTG1Q9NSN8 517 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 GHRLQ9UBU3 117 aa5.71□□□□□ -1.5
UPF3B-205ENST00000636792 SIRT4Q9Y6E7 314 aaPredicted RBP5.71□□□□□ -1.5
UPF3B-205ENST00000636792 ROS1P08922 2347 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 ZSCAN5BA6NJL1 495 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 NDUFS8O00217 210 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 MLNRO43193 412 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 NOL3O60936 208 aaKnown RBP5.7□□□□□ -1.5
UPF3B-205ENST00000636792 GABARAPO95166 117 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 CD8AP01732 235 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 IGHV1-46P01743 117 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 SOD3P08294 240 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 OCMP0CE72 109 aaPredicted RBP5.7□□□□□ -1.5
UPF3B-205ENST00000636792 UBBP0CG47 229 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 ATF1P18846 271 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 DNASE1P24855 282 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 BDKRB2P30411 391 aa5.7□□□□□ -1.5
UPF3B-205ENST00000636792 MTNR1BP49286 362 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms