RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 CPEB3Q8NE35 698 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 NELFAQ9H3P2 528 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 TRAV20A0A0B4J274 112 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 RAC3P60763 192 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 RFESDQ8TAC1 157 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 RAB39BQ96DA2 213 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 CMBLQ96DG6 245 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 KIRREL1Q96J84 757 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF649Q9BS31 505 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 MN1Q10571 1320 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 MGAMO43451 1857 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 CLDN1O95832 211 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 EFEMP2O95967 443 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 CD3EP07766 207 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 ATF1P18846 271 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 CA6P23280 308 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 CD96P40200 585 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 ST7LQ8TDW4 575 aa12.72□□□□□ -0.37
NEDD4L-238ENST00000635997 IFNA10P01566 189 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 CLDN20P56880 219 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 RPL23AP62750 156 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF721Q8TF20 911 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF2Q9BSG1 426 aaPredicted RBP12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ESRP2Q9H6T0 727 aaKnown RBP12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 A0A0G2JMZ2 1700 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 GABARAPH6UMI1 98 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 IMPA2O14732 288 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 MVDP53602 400 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 HSD17B11Q8NBQ5 300 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 OR2Z1Q8NG97 314 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 TM4SF19Q96DZ7 209 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 C4orf45Q96LM5 186 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 POLDIP2Q9Y2S7 368 aa12.71□□□□□ -0.37
NEDD4L-238ENST00000635997 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 XRCC2O43543 280 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 SKP2Q13309 424 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 RNLSQ5VYX0 342 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 CCDC190Q86UF4 302 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 OR10AC1Q8NH08 325 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 HRH4Q9H3N8 390 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.38
NEDD4L-238ENST00000635997 F8W036 122 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 CBR1P16152 277 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 BLOC1S1P78537 153 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 SSX1Q16384 188 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 TEX261Q6UWH6 196 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 C2CD4CQ8TF44 421 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 TRAF4Q9BUZ4 470 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 U3KQ87 197 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 SONP18583 2426 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 A0A0U1RQK1 487 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 NKX6-1P78426 367 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 TSEN54Q7Z6J9 526 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZNF573Q86YE8 665 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZFP82Q8N141 532 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 OR10J5Q8NHC4 309 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 C20orf85Q9H1P6 137 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZNF462Q96JM2 2506 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZNF205O95201 554 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 IGHV3-13P01766 116 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 IGHV3-7P01780 117 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 LPLP06858 475 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 MESTQ5EB52 335 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 APH1BQ8WW43 257 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 BOD1Q96IK1 185 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 HEYLQ9NQ87 328 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZFP57Q9NU63 452 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 TREM2Q9NZC2 230 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 K7EPK0 472 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 SULT1B1O43704 296 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ERGP11308 486 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 RAP2BP61225 183 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 BDH1Q02338 343 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 RAB31Q13636 194 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 MSMO1Q15800 293 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 C9orf152Q5JTZ5 239 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 PRSS35Q8N3Z0 413 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 SLC38A9Q8NBW4 561 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 TCTEX1D2Q8WW35 142 aa12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 APOBEC3DQ96AK3 386 aaPredicted RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
NEDD4L-238ENST00000635997 RD3LP0DJH9 198 aa12.69□□□□□ -0.38
NEDD4L-238ENST00000635997 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
NEDD4L-238ENST00000635997 PFDN5Q99471 154 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms