RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GMFBP60983 142 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF85Q03923 595 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 TP53I3Q53FA7 332 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 CATSPERDQ86XM0 798 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 OR10Z1Q8NGY1 313 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF671Q8TAW3 534 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 HPSE2Q8WWQ2 592 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 NUDT16L1Q9BRJ7 211 aaKnown RBP13.08□□□□□ -0.31
LINC00339-207ENST00000634712 SMPD3Q9NY59 655 aaPredicted RBP13.08□□□□□ -0.31
LINC00339-207ENST00000634712 AASSQ9UDR5 926 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 OPN4Q9UHM6 478 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 IGHV2-70DA0A0C4DH43 119 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 SYT7O43581 403 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 PAX8Q06710 450 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 LRRC36Q1X8D7 754 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 BPIFB2Q8N4F0 458 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 ACBD7Q8N6N7 88 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RHOXF1Q8NHV9 184 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RORBQ92753 470 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RDH12Q96NR8 316 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 PLEKHA1Q9HB21 404 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 V9GYS6 101 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 FBN1P35555 2871 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 A0A0A6YYJ9 748 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 KIR2DS1A0A191URI9 304 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 A0A1B0GTI1 187 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 DHRS7CA6NNS2 312 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 SRRM5B3KS81 715 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 DLGAP1O14490 977 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 SLC16A6O15403 523 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 AKR7A2O43488 359 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 ENSAO43768 121 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RCN1Q15293 331 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 DMRTC1Q5HYR2 192 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 SLC36A1Q7Z2H8 476 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 CCDC54Q8NEL0 328 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 OR14K1Q8NGZ2 314 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 OR51I2Q9H344 312 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 C8orf4Q9NR00 106 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 GPR173Q9NS66 373 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 ACOXLQ9NUZ1 547 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 CTSZQ9UBR2 303 aa13.07□□□□□ -0.32
LINC00339-207ENST00000634712 EXOGQ9Y2C4 368 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
LINC00339-207ENST00000634712 COL6A5A8TX70 2615 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 A6NIN4 97 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 H3BSH0 61 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 J3QLW9 94 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 DVL1O14640 695 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 TNFRSF13BO14836 293 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-207ENST00000634712 FADS2O95864 444 aaKnown RBP13.06□□□□□ -0.32
LINC00339-207ENST00000634712 SERPINA3P01011 423 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 LIPFP07098 398 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
LINC00339-207ENST00000634712 ZNF19P17023 458 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 GABRB1P18505 474 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 GLRA1P23415 457 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 ACTA2P62736 377 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 ACTG2P63267 376 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 PAX2Q02962 417 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 ZNF91Q05481 1191 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 HAGHLQ6PII5 290 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-207ENST00000634712 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 OR5T2Q8NGG2 359 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 LGALS12Q96DT0 336 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 CCL13Q99616 98 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 SUCNR1Q9BXA5 334 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-207ENST00000634712 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 KAAG1Q9UBP8 84 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 NUP50Q9UKX7 468 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
LINC00339-207ENST00000634712 NKX6-3A6NJ46 265 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 J3QRE1 110 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 NDUFB3O43676 98 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 RGS9O75916 674 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-207ENST00000634712 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-207ENST00000634712 HTR1AP08908 422 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 UBCP0CG48 685 aaKnown RBP13.05□□□□□ -0.32
LINC00339-207ENST00000634712 CCL1P22362 96 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 OR12D2P58182 307 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 KLHL22Q53GT1 634 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 TMEM244Q5VVB8 128 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 TTC23Q5W5X9 447 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms