RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MUC1P15941 1255 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-208ENST00000626828 FAHP16930 419 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 CCL1P22362 96 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 PEX2P28328 305 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 CD80P33681 288 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 PITPNBP48739 271 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 NPY4RP50391 375 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 GPM6AP51674 278 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 OR12D2P58182 307 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 CSNK2BP67870 215 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 ELF3P78545 371 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-208ENST00000626828 GALEQ14376 348 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 MICBQ29980 383 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 OGFRL1Q5TC84 451 aaPredicted RBP13.98□□□□□ -0.17
UBE3D-208ENST00000626828 TEX36Q5VZQ5 186 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 FDX2Q6P4F2 183 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 LHFPL3Q86UP9 236 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 SETD9Q8NE22 299 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 ZNF671Q8TAW3 534 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 CYGBQ8WWM9 190 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 HPSE2Q8WWQ2 592 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 RPL3LQ92901 407 aaKnown RBP13.98□□□□□ -0.17
UBE3D-208ENST00000626828 TMPRSS13Q9BYE2 586 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 MMP26Q9NRE1 261 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 INPP5EQ9NRR6 644 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 ERVK-18Q9QC07 812 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 CLN8Q9UBY8 286 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 OR5V1Q9UGF6 321 aa13.98□□□□□ -0.17
UBE3D-208ENST00000626828 J3QLW9 94 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 AVPP01185 164 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ZNF12P17014 697 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ZNF19P17023 458 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ACTA2P62736 377 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ACTG2P63267 376 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ADARB1P78563 741 aaKnown RBP13.97□□□□□ -0.17
UBE3D-208ENST00000626828 SCGB2A2Q13296 93 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ODF4Q2M2E3 257 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 CEP78Q5JTW2 689 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ZNF691Q5VV52 312 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 TMEM244Q5VVB8 128 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 PLCXD3Q63HM9 321 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 WDR25Q64LD2 544 aaPredicted RBP13.97□□□□□ -0.17
UBE3D-208ENST00000626828 TMEM42Q69YG0 159 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 PRSS35Q8N3Z0 413 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 OR2G2Q8NGZ5 317 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 APH1BQ8WW43 257 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 OR51I2Q9H344 312 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 ACOXLQ9NUZ1 547 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 MYRFQ9Y2G1 1151 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 INSIG2Q9Y5U4 225 aa13.97□□□□□ -0.17
UBE3D-208ENST00000626828 SRRM5B3KS81 715 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 ADAM20O43506 726 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 WBP4O75554 376 aaKnown RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 SERPINA3P01011 423 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 IGHA1P01876 353 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 GYPAP02724 150 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 HTR1AP08908 422 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 UBCP0CG48 685 aaKnown RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 CCR9P51686 369 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 HOXA4Q00056 320 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 IL18R1Q13478 541 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 WDR38Q5JTN6 314 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 CD276Q5ZPR3 534 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 ZNF841Q6ZN19 808 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 C1orf229Q6ZS94 237 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 FAM90A1Q86YD7 464 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 SYS1Q8N2H4 156 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 NANPQ8TBE9 248 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 RAB40AQ8WXH6 277 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 C12orf43Q96C57 262 aaKnown RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 C10orf35Q96D05 121 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 FGF23Q9GZV9 251 aaPredicted RBP13.96□□□□□ -0.17
UBE3D-208ENST00000626828 VCXQ9H320 206 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 HSPE1-MOB4S4R3N1 261 aa13.96□□□□□ -0.17
UBE3D-208ENST00000626828 COL6A5A8TX70 2615 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 LOC105371242A0A075B767 164 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 KIR2DS1A0A191URI9 304 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 IRGMA1A4Y4 181 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 H0YAE9 185 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 CLIC3O95833 236 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 RPSAP08865 295 aaKnown RBP13.95□□□□□ -0.18
UBE3D-208ENST00000626828 EGR1P18146 543 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 PAX8Q06710 450 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 MRPL28Q13084 256 aaKnown RBP13.95□□□□□ -0.18
UBE3D-208ENST00000626828 C11orf91Q3C1V1 193 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 BTNL3Q6UXE8 466 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 ZNF573Q86YE8 665 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 OR52I1Q8NGK6 324 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-208ENST00000626828 PELI1Q96FA3 418 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 C4orf36Q96KX1 117 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 MRI1Q9BV20 369 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 ALG8Q9BVK2 526 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 PLEKHA1Q9HB21 404 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 FGF20Q9NP95 211 aaPredicted RBP13.95□□□□□ -0.18
UBE3D-208ENST00000626828 GPR173Q9NS66 373 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 ERVK13-1Q9NX77 482 aa13.95□□□□□ -0.18
UBE3D-208ENST00000626828 FRRS1LQ9P0K9 344 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms