RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ATG12O94817 140 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ECI1P42126 302 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KIR2DS4P43632 304 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 GPM6AP51674 278 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 EDDM3AQ14507 147 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KIR2DS1Q14954 304 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 TMEM128Q5BJH2 165 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ZNF626Q68DY1 528 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 OR5M9Q8NGP3 310 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 FAAP24Q9BTP7 215 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KCNJ16Q9NPI9 418 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 PILRBQ9UKJ0 227 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 TRGV5A0A0B4J1U4 118 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 A0A0J9YW62 118 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 M0R296 226 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 PPT1P50897 306 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 PIGPP57054 158 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
TCF3-220ENST00000611869 C3AR1Q16581 482 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 CDH26Q8IXH8 852 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 DEFB124Q8NES8 71 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
TCF3-220ENST00000611869 SLC25A31Q9H0C2 315 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SIRPB1O00241 398 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 GDF9O60383 454 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 TTRP02766 147 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 MEOX1P50221 254 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 FUT6P51993 359 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 RPS4XP62701 263 aaKnown RBP11.63□□□□□ -0.55
TCF3-220ENST00000611869 SNTB1Q13884 538 aaKnown RBP11.63□□□□□ -0.55
TCF3-220ENST00000611869 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SFRP5Q5T4F7 317 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 FAM122BQ7Z309 247 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SCMH1Q96GD3 660 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 LUZP4Q9P127 313 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 MRPS18BQ9Y676 258 aaKnown RBP11.63□□□□□ -0.55
TCF3-220ENST00000611869 MS4A18H0YCH9 400 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 MSTNO14793 375 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 CASP6P55212 293 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 MS4A18Q3C1V0 323 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 SP6Q3SY56 376 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 OR2W3Q7Z3T1 314 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 SLC25A38Q96DW6 304 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 TGIF2Q9GZN2 237 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 SPACA1Q9HBV2 294 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 HS3ST3B1Q9Y662 390 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 ZNF362Q5T0B9 420 aaPredicted RBP11.62□□□□□ -0.55
TCF3-220ENST00000611869 APCDD1LQ8NCL9 501 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 SGK3Q96BR1 496 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 NMNAT2Q9BZQ4 307 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 RALGAPA1Q6GYQ0 2036 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 IGKV3D-11A0A0A0MRZ8 115 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 VSIG8P0DPA2 414 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 FABP6P51161 128 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 LSM6P62312 80 aaKnown RBP11.62□□□□□ -0.55
TCF3-220ENST00000611869 TMPRSS7Q7RTY8 843 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 OR4D10Q8NGI6 311 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 FAM213BQ8TBF2 198 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 MESP1Q9BRJ9 268 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 ICE1Q9Y2F5 2266 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 FRMPD3Q5JV73 1810 aa11.62□□□□□ -0.55
TCF3-220ENST00000611869 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 LMX1BO60663 402 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 HPP00738 406 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 TUBG1P23258 451 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 OR8G1Q15617 311 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 APOBEC3DQ96AK3 386 aaPredicted RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 TMPRSS13Q9BYE2 586 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 FAM212BQ9NTI7 297 aaPredicted RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 GPR137BO60478 399 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 WDR1O75083 606 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 SCO1O75880 301 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ADRA2CP18825 462 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 GLRA1P23415 457 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 SRPXP78539 464 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 SARAFQ96BY9 339 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 TRBV5-5A0A0J9YX44 114 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 A0A1W2PPC1 479 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 CD1AP06126 327 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 MLF1P58340 268 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ZXDAP98168 799 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ZP4Q12836 540 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 RHEBQ15382 184 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ZNF766Q5HY98 468 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ZNF573Q86YE8 665 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 LINC01387J3KSC0 135 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 CNR1P21554 472 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 MAGEA5P43359 124 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 MECP2P51608 486 aaKnown RBP11.61□□□□□ -0.55
TCF3-220ENST00000611869 EDDM3BP56851 147 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 ERVK-16P61578 105 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 SHEQ5VZ18 495 aa11.61□□□□□ -0.55
TCF3-220ENST00000611869 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms