RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	JMJD1C	Q15652	2540 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C5orf49	A4QMS7	147 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR5H1	A6NKK0	313 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SHISA9	B4DS77	424 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MTRF1	O75570	445 aa	Known RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	IGHV4-39	P01824	125 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CALCB	P10092	127 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CCL2	P13500	99 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	RAB3A	P20336	220 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TALDO1	P37837	337 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	IFITM3	Q01628	133 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	IL18	Q14116	193 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	RAB11B	Q15907	218 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	GABRA6	Q16445	453 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF181	Q2M3W8	571 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	GLYATL3	Q5SZD4	288 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	METAP1D	Q6UB28	335 aa	Predicted RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PGAP1	Q75T13	922 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	NKAIN3	Q8N8D7	197 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CCDC54	Q8NEL0	328 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SDHC	Q99643	169 aa	Predicted RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	NKX3-1	Q99801	234 aa	Predicted RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CCDC32	Q9BV29	185 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SRR	Q9GZT4	340 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CYSLTR2	Q9NS75	346 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR5V1	Q9UGF6	321 aa		11.63	□□□□□ -0.55
PPHLN1-223	ENST00000610488		M0R1B8	84 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SLC17A2	O00624	439 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SULT1B1	O43704	296 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	NDUFS7	O75251	213 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	APOA1	P02647	267 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	APLNR	P35414	380 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	THBS4	P35443	961 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	P2RY14	Q15391	338 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PYDC2	Q56P42	97 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	UBE2NL	Q5JXB2	153 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SLC22A25	Q6T423	547 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TMEM108	Q6UXF1	575 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488		Q6ZSR3	168 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF584	Q8IVC4	421 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CCDC36	Q8IYA8	594 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR8H2	Q8N162	312 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	JAGN1	Q8N5M9	183 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	DTX3	Q8N9I9	347 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR4M1	Q8NGD0	313 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	POM121L2	Q96KW2	1035 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C1QTNF5	Q9BXJ0	243 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	REG4	Q9BYZ8	158 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TMEM138	Q9NPI0	162 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PIGL	Q9Y2B2	252 aa		11.62	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PLCE1	Q9P212	2302 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	XRCC2	O43543	280 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ERCC1	P07992	297 aa	Predicted RBP	11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	FAH	P16930	419 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CFP	P27918	469 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	AGAP6	Q5VW22	663 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF529	Q6P280	563 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SSX8	Q7RTT4	187 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SEMA6D	Q8NFY4	1073 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR52N4	Q8NGI2	321 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR6M1	Q8NGM8	313 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	FOXRED1	Q96CU9	486 aa	Predicted RBP	11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MS4A3	Q96HJ5	214 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CMTM3	Q96MX0	182 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SOST	Q9BQB4	213 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C1QTNF6	Q9BXI9	259 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	RGCC	Q9H4X1	137 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C14orf119	Q9NWQ9	140 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF391	Q9UJN7	358 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ETV7	Q9Y603	341 aa		11.61	□□□□□ -0.55
PPHLN1-223	ENST00000610488	LOC390937	A0A1W2PQ73	354 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SSX4	O60224	188 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CD8A	P01732	235 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SERPINA5	P05154	406 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CD37	P11049	281 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	HOXB1	P14653	301 aa	Predicted RBP	11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PTBP1	P26599	531 aa	Known RBP eCLIP	11.6	□□□□□ -0.55	2e-7	■■■■■ 36.5
PPHLN1-223	ENST00000610488	HTR2C	P28335	458 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MAP2K3	P46734	347 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PRSS12	P56730	875 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF92	Q03936	586 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	KRTAP1-1	Q07627	177 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	FAM166A	Q6J272	317 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	COLCA1	Q6ZS62	124 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	LYSMD2	Q8IV50	215 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CMTM4	Q8IZR5	234 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR5AS1	Q8N127	324 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	GDPD1	Q8N9F7	314 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SLC30A7	Q8NEW0	376 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR51D1	Q8NGF3	324 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SYNPR	Q8TBG9	265 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	C10orf35	Q96D05	121 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SLC25A38	Q96DW6	304 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF75A	Q96N20	296 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SORCS2	Q96PQ0	1159 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CACNG6	Q9BXT2	260 aa		11.6	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PPP1R3E	Q9H7J1	279 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms