RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 LHBP01229 141 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 EGR1P18146 543 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 CFHR2P36980 270 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 SRSF2Q01130 221 aaKnown RBP11.16□□□□□ -0.62
SENP3-209ENST00000610454 ODF4Q2M2E3 257 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 SLC25A30Q5SVS4 291 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
SENP3-209ENST00000610454 SLC36A1Q7Z2H8 476 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 OR10Z1Q8NGY1 313 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 ZNF671Q8TAW3 534 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 HPSE2Q8WWQ2 592 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 UBE2FQ969M7 185 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 PPP1R14AQ96A00 147 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 C12orf43Q96C57 262 aaKnown RBP11.16□□□□□ -0.62
SENP3-209ENST00000610454 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
SENP3-209ENST00000610454 DHRS7CA6NNS2 312 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 SRRM5B3KS81 715 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 AKR7A2O43488 359 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 SYT7O43581 403 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 IGLV3-1P01715 115 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 LIPFP07098 398 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 ACTA2P62736 377 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 ACTG2P63267 376 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 PAX8Q06710 450 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 TP53I3Q53FA7 332 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 ZNF841Q6ZN19 808 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 KCTD20Q7Z5Y7 419 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 CATSPERDQ86XM0 798 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 PHC2Q8IXK0 858 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
SENP3-209ENST00000610454 ST8SIA4Q92187 359 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 RDH12Q96NR8 316 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 SLC29A1Q99808 456 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 SMPD3Q9NY59 655 aaPredicted RBP11.15□□□□□ -0.62
SENP3-209ENST00000610454 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 SLC22A13Q9Y226 551 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 V9GYS6 101 aa11.15□□□□□ -0.62
SENP3-209ENST00000610454 KIR2DS1A0A191URI9 304 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 DLGAP1O14490 977 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 DVL1O14640 695 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 NDUFB3O43676 98 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 ECDO95905 644 aaPredicted RBP11.14□□□□□ -0.63
SENP3-209ENST00000610454 UBCP0CG48 685 aaKnown RBP11.14□□□□□ -0.63
SENP3-209ENST00000610454 PPIAL4GP0DN37 164 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 GLRA1P23415 457 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 ZNF85Q03923 595 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 FAM76BQ5HYJ3 339 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 WDR38Q5JTN6 314 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
SENP3-209ENST00000610454 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 ZNF573Q86YE8 665 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 ACBD7Q8N6N7 88 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 C22orf15Q8WYQ4 148 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 RORBQ92753 470 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 CCL13Q99616 98 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 SLC6A7Q99884 636 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
SENP3-209ENST00000610454 GPR173Q9NS66 373 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 ACOXLQ9NUZ1 547 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 FAM118AQ9NWS6 357 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
SENP3-209ENST00000610454 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 H3BSH0 61 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 GATBO75879 557 aaKnown RBP11.13□□□□□ -0.63
SENP3-209ENST00000610454 FADS2O95864 444 aaKnown RBP11.13□□□□□ -0.63
SENP3-209ENST00000610454 SERPINA3P01011 423 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 FSHBP01225 129 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 DBTP11182 482 aaKnown RBP11.13□□□□□ -0.63
SENP3-209ENST00000610454 HAAOP46952 286 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 HILS1P60008 231 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 FGF12P61328 243 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 PAX2Q02962 417 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 ZNF91Q05481 1191 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 IKZF1Q13422 519 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 RCN1Q15293 331 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 LRRC36Q1X8D7 754 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 DMRTC1Q5HYR2 192 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 METTL11BQ5VVY1 283 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 KRT74Q7RTS7 529 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 ENTHD1Q8IYW4 607 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 OR14K1Q8NGZ2 314 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 UPRTQ96BW1 309 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 MED30Q96HR3 178 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
SENP3-209ENST00000610454 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms