RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 M0R1W7 72 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 LYNP07948 512 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 VSIG10L2P0DP72 767 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 GPM6AP51674 278 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 DGUOKQ16854 277 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 KLHL12Q53G59 568 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 ATPAF1Q5TC12 328 aaPredicted RBP12.16□□□□□ -0.46
CTSA-216ENST00000607212 HIST2H2BDQ6DRA6 164 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 ZNF788Q6ZQV5 615 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 OR2T6Q8NHC8 308 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 C8orf46Q8TAG6 207 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 OR5P3Q8WZ94 311 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 RORBQ92753 470 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 NKX3-1Q99801 234 aaPredicted RBP12.16□□□□□ -0.46
CTSA-216ENST00000607212 NMNAT2Q9BZQ4 307 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 ZNF319Q9P2F9 582 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 NOTCH1P46531 2555 aa12.16□□□□□ -0.46
CTSA-216ENST00000607212 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 G3V4G9 280 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 SIGLEC5O15389 551 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 GLCEO94923 617 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 AMY2BP19961 511 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 OPRL1P41146 370 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 HMGA2P52926 109 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 RPS7P62081 194 aaKnown RBP12.15□□□□□ -0.46
CTSA-216ENST00000607212 MICAQ29983 383 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 LRRC75BQ2VPJ9 315 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 LINC01590Q5TEZ4 76 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 ZNF770Q6IQ21 691 aaPredicted RBP12.15□□□□□ -0.46
CTSA-216ENST00000607212 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 OR10G2Q8NGC3 310 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 OR5D13Q8NGL4 314 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 AMELYQ99218 206 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 FBLN5Q9UBX5 448 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 FOXJ3Q9UPW0 622 aa12.15□□□□□ -0.46
CTSA-216ENST00000607212 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 PRR23D1E9PI22 279 aaPredicted RBP12.14□□□□□ -0.47
CTSA-216ENST00000607212 SELENOFO60613 162 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 PRB2P02812 416 aaPredicted RBP12.14□□□□□ -0.47
CTSA-216ENST00000607212 ACAA1P09110 424 aaPredicted RBP12.14□□□□□ -0.47
CTSA-216ENST00000607212 PRR23D2P0DMB1 279 aaPredicted RBP12.14□□□□□ -0.47
CTSA-216ENST00000607212 ACKR3P25106 362 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 LGALS4P56470 323 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 CAV3P56539 151 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 CEP78Q5JTW2 689 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 THAP5Q7Z6K1 395 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 KRT77Q7Z794 578 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 KLHDC1Q8N7A1 406 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 ZNRF1Q8ND25 227 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 ANGPTL6Q8NI99 470 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 ZNF671Q8TAW3 534 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 DGCR6LQ9BY27 220 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 ARL8BQ9NVJ2 186 aa12.14□□□□□ -0.47
CTSA-216ENST00000607212 A0A1W2PPH5 198 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 SNX3O60493 162 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 PEX14O75381 377 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 RHBDL1O75783 438 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 CST4P01036 141 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 COX7A1P24310 79 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 PAX6P26367 422 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 GNGT1P63211 74 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 NSUN5P1Q3KNT7 163 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 FAM98BQ52LJ0 330 aaKnown RBP12.13□□□□□ -0.47
CTSA-216ENST00000607212 PLA1AQ53H76 456 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
CTSA-216ENST00000607212 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 OR8B12Q8NGG6 310 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 ACTR3BQ9P1U1 418 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 LAMP5Q9UJQ1 280 aa12.13□□□□□ -0.47
CTSA-216ENST00000607212 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 GNGT2O14610 69 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 GSC2O15499 205 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 PLXNB1O43157 2135 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 PSG2P11465 335 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 MAP2K3P46734 347 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
CTSA-216ENST00000607212 GNG3P63215 75 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 SPATS1Q496A3 300 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
CTSA-216ENST00000607212 C11orf88Q6PI97 169 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms