RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 GLRA1P23415 457 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 IFNGR2P38484 337 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 RAB13P51153 203 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 LGALS4P56470 323 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
USE1-208ENST00000600970 CNN3Q15417 329 aaKnown RBP13.54□□□□□ -0.24
USE1-208ENST00000600970 SNCBQ16143 134 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 DEFB121Q5J5C9 76 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 LHFPL4Q7Z7J7 247 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 FTMTQ8N4E7 242 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 OR52L1Q8NGH7 329 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 OR52H1Q8NGJ2 320 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 OR5K1Q8NHB7 308 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 RNF170Q96K19 258 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 OR5M11Q96RB7 305 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 OR10A2Q9H208 303 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 BRD7Q9NPI1 651 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 FGFR1OP2Q9NVK5 253 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 V9GYQ6 96 aa13.54□□□□□ -0.24
USE1-208ENST00000600970 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 A6NDX4 124 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 FAM90A8PA6NJQ4 464 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 RHBDL1O75783 438 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 APOC1P02654 83 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 CLUP10909 449 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 COX7A1P24310 79 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 ACKR3P25106 362 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
USE1-208ENST00000600970 ERVFRD-1P60508 538 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 CRMP1Q14194 572 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 PLA1AQ53H76 456 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 Q6ZS46 218 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 TMEM219Q86XT9 240 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 HPSE2Q8WWQ2 592 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 PIGCQ92535 297 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 PGAM5Q96HS1 289 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 WWC2-AS2Q96NR7 200 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 PRSS22Q9GZN4 317 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 EFCAB1Q9HAE3 211 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 ABCD2Q9UBJ2 740 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
USE1-208ENST00000600970 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 PEX14O75381 377 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 GLCEO94923 617 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 CST4P01036 141 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 SPI1P17947 270 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 RRM2P31350 389 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 RPL13AP3Q6NVV1 102 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 HACD2Q6Y1H2 254 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 OR8D4Q8NGM9 314 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 OR6K6Q8NGW6 343 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 RNF133Q8WVZ7 376 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 SDSLQ96GA7 329 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 PYURFQ96I23 114 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 ABHD6Q9BV23 337 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 NMNAT2Q9BZQ4 307 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 RGCCQ9H4X1 137 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 YY1AP1Q9H869 796 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 IL20Q9NYY1 176 aa13.52□□□□□ -0.25
USE1-208ENST00000600970 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
USE1-208ENST00000600970 NUDT2P50583 147 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 CAPZA1P52907 286 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 SLC25A1P53007 311 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 KRTAP10-11P60412 298 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 RPL31P62899 125 aaKnown RBP13.51□□□□□ -0.25
USE1-208ENST00000600970 CD83Q01151 205 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 TMEM200BQ69YZ2 307 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 ZDHHC23Q8IYP9 409 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 OR6N2Q8NGY6 317 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 AMELYQ99218 206 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 LRP12Q9Y561 859 aa13.51□□□□□ -0.25
USE1-208ENST00000600970 A0A1W2PPH5 198 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 CCL3L1P16619 93 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 OPRL1P41146 370 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 GPM6AP51674 278 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 PSME3P61289 254 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 BLCAPP62952 87 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 LINC01590Q5TEZ4 76 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 OR51I2Q9H344 312 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 GORASP2Q9H8Y8 452 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 USE1Q9NZ43 259 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 PITPNC1Q9UKF7 332 aa13.5□□□□□ -0.25
USE1-208ENST00000600970 hCG_1809904A0A1W2PP81 198 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 A0A1W2PPE2 198 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 A0A1W2PR64 198 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 A0A1W2PRV1 198 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 GMNNO75496 209 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 PF4V1P10720 104 aa13.49□□□□□ -0.25
USE1-208ENST00000600970 VDAC2P45880 294 aaPredicted RBP13.49□□□□□ -0.25
USE1-208ENST00000600970 BLVRAP53004 296 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms