RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DCAF16Q9NXF7 216 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 APCP25054 2843 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 TRAV8-7A0A075B6U6 113 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF732B4DXR9 585 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 SSX4O60224 188 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 RGS9O75916 674 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 CD2P06729 351 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 GRPP07492 148 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 DAOP14920 347 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 IGFBP3P17936 291 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 GPM6AP51674 278 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF154Q13106 437 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF529Q6P280 563 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 RNF144BQ7Z419 303 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 CEACAM19Q7Z692 300 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 SERPINA12Q8IW75 414 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 LRRC75A-AS1Q8N1F1 130 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 CELF2-AS1Q8N7Q2 184 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 OR1M1Q8NGA1 313 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 OR5A2Q8NGI9 324 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF420Q8TAQ5 688 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 HIST1H2AAQ96QV6 131 aa16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-222ENST00000600320 PQLC2LA1A4F0 135 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 OR5B21A6NL26 309 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 GABRPO00591 440 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 SERPINA3P01011 423 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 AZGP1P25311 298 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 GATA4P43694 442 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 GNG3P63215 75 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 TRAM1Q15629 374 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 MOGAT3Q86VF5 341 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 KRTAP1-3Q8IUG1 177 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 C11orf53Q8IXP5 236 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF525Q8N782 197 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 TMIGD2Q96BF3 282 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 GCM1Q9NP62 436 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 UFSP2Q9NUQ7 469 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 C14orf119Q9NWQ9 140 aa16.91■□□□□ 0.3
SHKBP1-222ENST00000600320 ARID1AO14497 2285 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 LRBAP50851 2863 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 IGKV1-27A0A075B6S5 117 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 IGHV1-69-2A0A0G2JMI3 117 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 FAM230AA0A1W2PPH8 454 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 RP2O75695 350 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 TFAP2AP05549 437 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 TNFRSF1AP19438 455 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 PSMA1P25786 263 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 CRYBB2P43320 205 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 MZT1Q08AG7 82 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 CNN3Q15417 329 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 FAM76BQ5HYJ3 339 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 CD200R1LQ6Q8B3 271 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF826PQ6ZT77 177 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 OR5D14Q8NGL3 314 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 RDH5Q92781 318 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 RPL3LQ92901 407 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 YIPF6Q96EC8 236 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 TECTBQ96PL2 329 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 OR51I2Q9H344 312 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 BARX1Q9HBU1 254 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 SLC7A11Q9UPY5 501 aa16.9■□□□□ 0.3
SHKBP1-222ENST00000600320 CREBBPQ92793 2442 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 TRDV1A0A1B0GX56 115 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 A6NLC8 198 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 TMEM210A6NLX4 147 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 SULT1B1O43704 296 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 GPX5O75715 221 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 UCHL1P09936 223 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 CD36P16671 472 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 FSTP19883 344 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 ALDH3B2P48448 385 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 HOXA4Q00056 320 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 CRIP3Q6Q6R5 217 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 SPACA5Q96QH8 159 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 TLNRD1Q9H1K6 362 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 OR51E2Q9H255 320 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 C1orf123Q9NWV4 160 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 TANC2Q9HCD6 1990 aa16.89■□□□□ 0.29
SHKBP1-222ENST00000600320 LRP5LA4QPB2 252 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 ALX3O95076 343 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 RAB3AP20336 220 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 PRKACBP22694 351 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 GADD45AP24522 165 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 MAPK3P27361 379 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 FUT6P51993 359 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 MRPS11P82912 194 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 CARTPTQ16568 116 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 SCCPDHQ8NBX0 429 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 DNAAF1Q8NEP3 725 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 OR13F1Q8NGS4 319 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 THRSPQ92748 146 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 SPSB1Q96BD6 273 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 BORCS8Q96FH0 119 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 NKX3-1Q99801 234 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 FOXC2Q99958 501 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 STUB1Q9UNE7 303 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 PPP1R3CQ9UQK1 317 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 DYSFO75923 2080 aa16.88■□□□□ 0.29
SHKBP1-222ENST00000600320 MYO9AB2RTY4 2548 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms