RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 OR4F5Q8NH21 305 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 OPALINQ96PE5 141 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 MS4A7Q9GZW8 240 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 MOB1AQ9H8S9 216 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 CDH20Q9HBT6 801 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 TRIM36Q9NQ86 728 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 TBCCD1Q9NVR7 557 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 ZNF319Q9P2F9 582 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 OR52A1Q9UKL2 312 aa11.68□□□□□ -0.54
SHKBP1-218ENST00000598907 A0A1B0GUS0 222 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 MDFIC2A0A1B0GVS7 189 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 C5orf63A6NC05 138 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 OR4C45A6NMZ5 311 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 LOC110117498-PIK3R3F6TDL0 507 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 J3QW42 95 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 CLPTM1O96005 669 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 IGLV3-1P01715 115 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 TTRP02766 147 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 SLC2A1P11166 492 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 CPEP16870 476 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 ALDH3B2P48448 385 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 GP2P55259 537 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 NEDD8Q15843 81 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 WDR38Q5JTN6 314 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 C16orf87Q6PH81 154 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 ELMOD2Q8IZ81 293 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 APOBEC3DQ96AK3 386 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 PBOV1Q9GZY1 135 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 SP140LQ9H930 580 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 SLC22A13Q9Y226 551 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 WIPI2Q9Y4P8 454 aa11.67□□□□□ -0.54
SHKBP1-218ENST00000598907 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 ISPDA4D126 451 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 NGFP01138 241 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 LCATP04180 440 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 CCNOP22674 350 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 UCP2P55851 309 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 CCL8P80075 99 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 TAF9Q16594 264 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 TIGD6Q17RP2 521 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 SNAI3Q3KNW1 292 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 ARL9Q6T311 187 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 Q6ZSR3 168 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 FAM57BQ71RH2 274 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 OR8B12Q8NGG6 310 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 VCX3AQ9NNX9 186 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 DUSP13Q9UII6 198 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 SCOCQ9UIL1 159 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-218ENST00000598907 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 A0A1B0GTI1 187 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 ZFPL1O95159 310 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 ISG15P05161 165 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 CRYBA1P05813 215 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 ANXA2P07355 339 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 NR4A1P22736 598 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 TUBG1P23258 451 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 LIPAP38571 399 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 SLC6A9P48067 706 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 EVX1P49640 407 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 SSX1Q16384 188 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 BCL2L15Q5TBC7 163 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 RFPL4BQ6ZWI9 263 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 C1orf174Q8IYL3 243 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 ZFP41Q8N8Y5 198 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 SPSB4Q96A44 273 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 SGK3Q96BR1 496 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 PGAM5Q96HS1 289 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 BRD7Q9NPI1 651 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 TUBG2Q9NRH3 451 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 EIF3KQ9UBQ5 218 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 CACNG2Q9Y698 323 aa11.65□□□□□ -0.54
SHKBP1-218ENST00000598907 TENM3Q9P273 2699 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 TMEM212A6NML5 194 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 CLDN25C9JDP6 229 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 XRCC2O43543 280 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 CELP19835 753 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 CCL1P22362 96 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 PSMB9P28065 219 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 RELBQ01201 579 aa11.64□□□□□ -0.55
SHKBP1-218ENST00000598907 TSTQ16762 297 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms