RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CFHR2P36980 270 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 MLLT11Q13015 90 aaPredicted RBP8.89□□□□□ -0.99
LIG1-210ENST00000596332 MED22Q15528 200 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 ZNF181Q2M3W8 571 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 MOB3CQ70IA8 216 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 MOGAT3Q86VF5 341 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 CALHM1Q8IU99 346 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 PHC2Q8IXK0 858 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 ZDHHC23Q8IYP9 409 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 GCSAMQ8N6F7 178 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 SPERTQ8NA61 448 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 OR5A2Q8NGI9 324 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 OR51A2Q8NGJ7 313 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 RPL3LQ92901 407 aaKnown RBP8.89□□□□□ -0.99
LIG1-210ENST00000596332 C10orf35Q96D05 121 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 PAPOLGQ9BWT3 736 aaKnown RBP8.89□□□□□ -0.99
LIG1-210ENST00000596332 CCDC90BQ9GZT6 254 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 METTL17Q9H7H0 456 aaPredicted RBP8.89□□□□□ -0.99
LIG1-210ENST00000596332 DECR2Q9NUI1 292 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 TMEM106BQ9NUM4 274 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 BLOC1S6Q9UL45 172 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 TANC2Q9HCD6 1990 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 TRAV8-7A0A075B6U6 113 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 IGHV4-61A0A0C4DH41 118 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 MAGEA13PA6NCF6 341 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 ZNF732B4DXR9 585 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 CDIPTO14735 213 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 RHBDL1O75783 438 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 CYB5R3P00387 301 aaPredicted RBP8.88□□□□□ -0.99
LIG1-210ENST00000596332 IGHV2-70P01814 119 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 EGR1P18146 543 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 ATF1P18846 271 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 AMY2BP19961 511 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 EEF1B2P24534 225 aaKnown RBP8.88□□□□□ -0.99
LIG1-210ENST00000596332 NR4A2P43354 598 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 SOX2P48431 317 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 SRP9P49458 86 aaKnown RBP8.88□□□□□ -0.99
LIG1-210ENST00000596332 GPM6AP51674 278 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 TMEM33P57088 247 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 TAS2R43P59537 309 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 RPS25P62851 125 aaKnown RBP8.88□□□□□ -0.99
LIG1-210ENST00000596332 KRTAP1-1Q07627 177 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 YIF1BQ5BJH7 314 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 FAM27D1Q5T7N8 215 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 SYT6Q5T7P8 510 aaPredicted RBP8.88□□□□□ -0.99
LIG1-210ENST00000596332 LIPKQ5VXJ0 399 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 WDR82Q6UXN9 313 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 COMMD2Q86X83 199 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 SCCPDHQ8NBX0 429 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 GPR148Q8TDV2 347 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 PP6455Q8WZ26 134 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 AQP3Q92482 292 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 FAM168AQ92567 244 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 CCL17Q92583 94 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 SEH1LQ96EE3 360 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 RNF170Q96K19 258 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 BPESC1Q9GZL8 116 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 CHODLQ9H9P2 273 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 TMEM165Q9HC07 324 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 UFSP2Q9NUQ7 469 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 PPP1R3CQ9UQK1 317 aa8.88□□□□□ -0.99
LIG1-210ENST00000596332 FLNAP21333 2647 aaKnown RBP8.87□□□□□ -0.99
LIG1-210ENST00000596332 A0A1W2PPK0 400 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 SHISA3A0PJX4 238 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 F8VVB4 439 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 F8VWA3 439 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 NDUFS8O00217 210 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ZNF205O95201 554 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 FSTL3O95633 263 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 GRPP07492 148 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ZNF12P17014 697 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 TNFRSF1AP19438 455 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 MPZP25189 248 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 IL2RGP31785 369 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 TGFBR2P37173 567 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 PDLIM4P50479 330 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 DSCR9P59020 149 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ERVK11-1P61568 191 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 LMO4P61968 165 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ZMYND11Q15326 602 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 Q499Y3 187 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ARMCX4Q5H9R4 360 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 CD200R1LQ6Q8B3 271 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ZNF367Q7RTV3 350 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ANGPTL5Q86XS5 388 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 MAPK1IP1LQ8NDC0 245 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 OR13C3Q8NGS6 347 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 MUL1Q969V5 352 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ERGIC1Q969X5 290 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 TMEM106AQ96A25 262 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 DERL3Q96Q80 235 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 REG4Q9BYZ8 158 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 EGLN1Q9GZT9 426 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 COMMD4Q9H0A8 199 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 MYOZ1Q9NP98 299 aaPredicted RBP8.87□□□□□ -0.99
LIG1-210ENST00000596332 C1orf123Q9NWV4 160 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 WIPI2Q9Y4P8 454 aa8.87□□□□□ -0.99
LIG1-210ENST00000596332 ACANP16112 2415 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms