RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 KCTD8Q6ZWB6 473 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 C11orf53Q8IXP5 236 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF676Q8N7Q3 588 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 COMMD4Q9H0A8 199 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 TMEM165Q9HC07 324 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 hCG_1807616A0A1W2PRN6 198 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 A8MV72 311 aaPredicted RBP21.63■■□□□ 1.05
TRIM28-204ENST00000594806 GATBO75879 557 aaKnown RBP21.63■■□□□ 1.05
TRIM28-204ENST00000594806 LHBP01229 141 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 THBS2P35442 1172 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 RPL22L1Q6P5R6 122 aaKnown RBP21.63■■□□□ 1.05
TRIM28-204ENST00000594806 AHSA2Q719I0 299 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 OR10Z1Q8NGY1 313 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 PP6455Q8WZ26 134 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 PATZ1Q9HBE1 687 aaKnown RBP21.63■■□□□ 1.05
TRIM28-204ENST00000594806 YAE1D1Q9NRH1 226 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 TMEM160Q9NX00 188 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 BABAM2Q9NXR7 383 aa21.63■■□□□ 1.05
TRIM28-204ENST00000594806 ANKRD61A6NGH8 418 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 SLC1A7O00341 560 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 RRP9O43818 475 aaKnown RBP21.62■■□□□ 1.05
TRIM28-204ENST00000594806 TGFAP01135 160 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF404Q494X3 552 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 CEP78Q5JTW2 689 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 RNLSQ5VYX0 342 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 RDH10Q8IZV5 341 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 OR5AK2Q8NH90 309 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 MYDGFQ969H8 173 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 CHST5Q9GZS9 411 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 UBAP1Q9NZ09 502 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 MIOXQ9UGB7 285 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 TPRKBQ9Y3C4 175 aa21.62■■□□□ 1.05
TRIM28-204ENST00000594806 ABCA2Q9BZC7 2435 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 TRAV38-1A0A0B4J264 116 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 TRBV2A0A0J9YWF9 115 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF732B4DXR9 585 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 LGALS8O00214 317 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 NDUFA2O43678 99 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF16P17020 682 aaPredicted RBP21.61■■□□□ 1.05
TRIM28-204ENST00000594806 PCMT1P22061 227 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 GPM6AP51674 278 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 OR2G6Q5TZ20 316 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 WDR82Q6UXN9 313 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF826PQ6ZT77 177 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 Q71RC1 249 aaPredicted RBP21.61■■□□□ 1.05
TRIM28-204ENST00000594806 GCSAMQ8N6F7 178 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 SCCPDHQ8NBX0 429 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 OR51F2Q8NH61 342 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 FGF23Q9GZV9 251 aaPredicted RBP21.61■■□□□ 1.05
TRIM28-204ENST00000594806 OR51I2Q9H344 312 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 KCNS2Q9ULS6 477 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 SLC7A11Q9UPY5 501 aa21.61■■□□□ 1.05
TRIM28-204ENST00000594806 E9PI62 339 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 CDIPTO14735 213 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 DVL1P1P54792 670 aaPredicted RBP21.6■■□□□ 1.05
TRIM28-204ENST00000594806 DCDC5Q6ZRR9 648 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF573Q86YE8 665 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF671Q8TAW3 534 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 LRRC29Q8WV35 223 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 GPR173Q9NS66 373 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 CLEC2DQ9UHP7 191 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 DOCK11Q5JSL3 2073 aa21.6■■□□□ 1.05
TRIM28-204ENST00000594806 FAM157AC9JC47 383 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 F5H0A9 414 aaPredicted RBP21.59■■□□□ 1.05
TRIM28-204ENST00000594806 LMX1BO60663 402 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 ZFPL1O95159 310 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 CDK1P06493 297 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 MSMBP08118 114 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 MUC1P15941 1255 aaPredicted RBP21.59■■□□□ 1.05
TRIM28-204ENST00000594806 TAS2R43P59537 309 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 HNRNPA0Q13151 305 aaKnown RBP21.59■■□□□ 1.05
TRIM28-204ENST00000594806 CDK5R1Q15078 307 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 UTS2BQ765I0 119 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 RPS4Y2Q8TD47 263 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 RPL3LQ92901 407 aaKnown RBP21.59■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF184Q99676 751 aaPredicted RBP21.59■■□□□ 1.05
TRIM28-204ENST00000594806 TMEM246Q9BRR3 403 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 Q9H521 79 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 ERGIC3Q9Y282 383 aa21.59■■□□□ 1.05
TRIM28-204ENST00000594806 OOEPA6NGQ2 149 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 CEACAM18A8MTB9 384 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 SRRM5B3KS81 715 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 MYL12BO14950 172 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 OGG1O15527 345 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 FOXH1O75593 365 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF20P17024 532 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 C21orf33P30042 268 aaPredicted RBP21.58■■□□□ 1.05
TRIM28-204ENST00000594806 CNN3Q15417 329 aaKnown RBP21.58■■□□□ 1.05
TRIM28-204ENST00000594806 FAM201AQ5SY85 155 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 TEX36Q5VZQ5 186 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 NLRC3Q7RTR2 1065 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 GLCCI1Q86VQ1 547 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 ZNF485Q8NCK3 441 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 OR13C3Q8NGS6 347 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 GATAD2BQ8WXI9 593 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 RASSF4Q9H2L5 321 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 PCDHGB5Q9Y5G0 923 aa21.58■■□□□ 1.05
TRIM28-204ENST00000594806 TRAV20A0A0B4J274 112 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 PQLC2LA1A4F0 135 aa21.57■■□□□ 1.04
TRIM28-204ENST00000594806 A6NIN4 97 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms