RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-215	ENST00000592960	CCDC54	Q8NEL0	328 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	TMEM106A	Q96A25	262 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	REEP6	Q96HR9	211 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	RAB1B	Q9H0U4	201 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	SLITRK2	Q9H156	845 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	RGCC	Q9H4X1	137 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	PTTG2	Q9NZH5	202 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	EIF3K	Q9UBQ5	218 aa	Known RBP	12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF391	Q9UJN7	358 aa		12.81	□□□□□ -0.36
PKN1-215	ENST00000592960	TRBV5-7	A0A0A0MS05	114 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	C5orf63	A6NC05	138 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	PIN1P1	O15428	100 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	MTRF1	O75570	445 aa	Known RBP	12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	IL1A	P01583	271 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	IGLV3-1	P01715	115 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	CRYAA	P02489	173 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	CECR9	P0C854	216 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	IL2RG	P31785	369 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	SDC2	P34741	201 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	MXD1	Q05195	221 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	MALL	Q13021	153 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	GLYATL3	Q5SZD4	288 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	COLCA1	Q6ZS62	124 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	OR2AE1	Q8NHA4	323 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	DYNC2LI1	Q8TCX1	351 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	NEU4	Q8WWR8	484 aa	Predicted RBP	12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	SGK3	Q96BR1	496 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	PPIL3	Q9H2H8	161 aa	Known RBP	12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	PLEKHA1	Q9HB21	404 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	TCF7L1	Q9HCS4	588 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	METRN	Q9UJH8	293 aa		12.8	□□□□□ -0.36
PKN1-215	ENST00000592960	TRAV1-2	A0A0B4J238	106 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960		J3QW42	95 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	DHRS3	O75911	302 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	VENTX	O95231	258 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	DAO	P14920	347 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF20	P17024	532 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	EGR1	P18146	543 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	CFL1	P23528	166 aa	Known RBP	12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	SOX6	P35712	828 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	DVL1P1	P54792	670 aa	Predicted RBP	12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	RIN1	Q13671	783 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	DGUOK	Q16854	277 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	TPRA1	Q86W33	373 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	SEMA6D	Q8NFY4	1073 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	OR5L1	Q8NGL2	311 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	ORAI1	Q96D31	301 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	LYZL4	Q96KX0	146 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	SNTG1	Q9NSN8	517 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	TBCCD1	Q9NVR7	557 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	CKLF	Q9UBR5	152 aa		12.79	□□□□□ -0.36
PKN1-215	ENST00000592960	SHISA3	A0PJX4	238 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	PDCD5	O14737	125 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	CLEC2L	P0C7M8	214 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	SRM	P19623	302 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	GNAL	P38405	381 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	RPS19	P39019	145 aa	Known RBP	12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	WNT5A	P41221	380 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	NAAA	Q02083	359 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	UNQ6126/PRO20091	Q6UXV3	157 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	PLPP7	Q8NBV4	271 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	NUP37	Q8NFH4	326 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	OR14K1	Q8NGZ2	314 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	SGMS2	Q8NHU3	365 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	FGGY	Q96C11	551 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	OR51B6	Q9H340	312 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	TPK1	Q9H3S4	243 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	OPA3	Q9H6K4	179 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	ZNF442	Q9H7R0	627 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	PTTG3P	Q9NZH4	202 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	CCDC59	Q9P031	241 aa	Known RBP	12.78	□□□□□ -0.36
PKN1-215	ENST00000592960		V9GYS6	101 aa		12.78	□□□□□ -0.36
PKN1-215	ENST00000592960	SMIM30	A4D0T7	59 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	VSTM5	A8MXK1	200 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	NGF	P01138	241 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	FST	P19883	344 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	RAB3B	P20337	219 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	CALCR	P30988	508 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	MAP2K3	P46734	347 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	RORC	P51449	518 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	PPP3R1	P63098	170 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	ZNF92	Q03936	586 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	HNRNPA0	Q13151	305 aa	Known RBP	12.77	□□□□□ -0.37
PKN1-215	ENST00000592960		Q6ZSR3	168 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	RFPL4B	Q6ZWI9	263 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	MRPL21	Q7Z2W9	205 aa	Known RBP	12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	SERPINA12	Q8IW75	414 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	ZNF101	Q8IZC7	436 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	SPSB4	Q96A44	273 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	TAS2R4	Q9NYW5	299 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	FOXJ3	Q9UPW0	622 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	PIGL	Q9Y2B2	252 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	STARD10	Q9Y365	291 aa		12.77	□□□□□ -0.37
PKN1-215	ENST00000592960	IGHV2OR16-5	A0A0B4J2B6	119 aa		12.76	□□□□□ -0.37
PKN1-215	ENST00000592960	hCG_38984	A0A1B0GV85	526 aa		12.76	□□□□□ -0.37
PKN1-215	ENST00000592960	TMEM89	A2RUT3	159 aa		12.76	□□□□□ -0.37
PKN1-215	ENST00000592960	ANKRD61	A6NGH8	418 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms