RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 THADAQ6YHU6 1953 aa1.92□□□□□ -2.1
SMAD4-207ENST00000589076 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
SMAD4-207ENST00000589076 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SPTBN4Q9H254 2564 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 RYR1P21817 5038 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 JCADQ9P266 1359 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TNIKQ9UKE5 1360 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 ARPC4-TTLL3A0A0A6YYG9 625 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 IGHV1-3A0A0C4DH29 117 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 A0A0J9YYE9 177 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 CENPBD1B2RD01 187 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 M0R1X1 148 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TTC4O95801 387 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 OTCP00480 354 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TRBC1P01850 177 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 MBP02144 154 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 CRYGCP07315 174 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SLC35G6P0C7Q6 338 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 HOXB8P17481 243 aaPredicted RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 CXCR1P25024 350 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 C2orf54Q08AI8 447 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 C6orf99Q4VX62 202 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TMEM236Q5W0B7 351 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SLC35G3Q8N808 338 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TMEM105Q8N8V8 129 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 WDR31Q8NA23 367 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 ST20-AS1Q8NBB2 130 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 APCDD1LQ8NCL9 501 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 BAALCQ8WXS3 180 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 RMI2Q96E14 147 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SMARCD1Q96GM5 515 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 FAM19A4Q96LR4 140 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 NAPGQ99747 312 aaPredicted RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 TMEM175Q9BSA9 504 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 RTBDNQ9BSG5 229 aaPredicted RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 NUDT9Q9BW91 350 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 KIR3DX1Q9H7L2 352 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 LZTFL1Q9NQ48 299 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 HEBP1Q9NRV9 189 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 ZMAT5Q9UDW3 170 aaKnown RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 MARCOQ9UEW3 520 aaPredicted RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 FARSAQ9Y285 508 aaKnown RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SIGLEC7Q9Y286 467 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 SIGLEC9Q9Y336 463 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 CHTOPQ9Y3Y2 248 aaKnown RBP1.91□□□□□ -2.1
SMAD4-207ENST00000589076 LRRC42Q9Y546 428 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 YEATS2Q9ULM3 1422 aa1.91□□□□□ -2.1
SMAD4-207ENST00000589076 LOC100653049A0A140TA62 436 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ISPDA4D126 451 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 KRT34O76011 436 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ETHE1O95571 254 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 IGLV2-8P01709 118 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 RPN2P04844 631 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 IVDP26440 423 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 MTPNP58546 118 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 PAFAH1B2P68402 229 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 SLC35A1P78382 337 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 INCA1Q0VD86 236 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 FUT5Q11128 374 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ST3GAL4Q11206 333 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 STK38Q15208 465 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 KRTAP13-2Q52LG2 175 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 DNLZQ5SXM8 178 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ZNF101Q8IZC7 436 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 LYPD1Q8N2G4 141 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 LRRC52Q8N7C0 313 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 OR51L1Q8NGJ5 315 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 OR52K1Q8NGK4 314 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 RXFP2Q8WXD0 754 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 OR8D1Q8WZ84 308 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 TOP1MTQ969P6 601 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 MRPL48Q96GC5 212 aaKnown RBP1.9□□□□□ -2.11
SMAD4-207ENST00000589076 SNF8Q96H20 258 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 IP6K3Q96PC2 410 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ALS2CR12Q96Q35 445 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ULBP2Q9BZM5 246 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ING2Q9H160 280 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 GAL3ST2Q9H3Q3 398 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 ZSCAN16Q9H4T2 348 aaPredicted RBP1.9□□□□□ -2.11
SMAD4-207ENST00000589076 NDRG2Q9UN36 371 aaKnown RBP1.9□□□□□ -2.11
SMAD4-207ENST00000589076 FLVCR2Q9UPI3 526 aa1.9□□□□□ -2.11
SMAD4-207ENST00000589076 MIA3Q5JRA6 1907 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 ZFHX4Q86UP3 3567 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 DYSFO75923 2080 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 A8MUU9 505 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 BTNL10A8MVZ5 291 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 DFFAO00273 331 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 CCDC22O60826 627 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 CDRT1O95170 752 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 PTTG1O95997 202 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 IGLV3-19P01714 112 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 STAG3L2P0CL84 134 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 ZNF14P17017 642 aaPredicted RBP1.89□□□□□ -2.11
SMAD4-207ENST00000589076 CELP19835 753 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 PRKACBP22694 351 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 TAS2R60P59551 318 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 PPP1CAP62136 330 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 DMC1Q14565 340 aa1.89□□□□□ -2.11
SMAD4-207ENST00000589076 ATP6V1FQ16864 119 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms