RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ALX3O95076 343 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 GRPP07492 148 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 OCMP0CE72 109 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-220ENST00000588917 IRF2P14316 349 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 CPEP16870 476 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 PSMA1P25786 263 aaKnown RBP16.56■□□□□ 0.24
CIRBP-220ENST00000588917 FUT6P51993 359 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 CARTPTQ16568 116 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 Q499Y3 187 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 UBE2UQ5VVX9 321 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 DNM1P46Q6ZS02 220 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 KCTD8Q6ZWB6 473 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 C1orf87Q8N0U7 546 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF525Q8N782 197 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 TSPAN14Q8NG11 270 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 OR10AC1Q8NH08 325 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF696Q9H7X3 374 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 VCX3AQ9NNX9 186 aa16.56■□□□□ 0.24
CIRBP-220ENST00000588917 NAV3Q8IVL0 2385 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 PNMA8CA0A1B0GUJ8 204 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF732B4DXR9 585 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 PCMT1P22061 227 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 PRKACBP22694 351 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 GIFP27352 417 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 MAPK3P27361 379 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-220ENST00000588917 CEP78Q5JTW2 689 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF573Q86YE8 665 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 DNAAF1Q8NEP3 725 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 OR1M1Q8NGA1 313 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 Q8TCH9 128 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 ADAT3Q96EY9 351 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-220ENST00000588917 TIMD4Q96H15 378 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 PIMREGQ9BSJ6 248 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 ZCCHC4Q9H5U6 513 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 GPR173Q9NS66 373 aa16.55■□□□□ 0.24
CIRBP-220ENST00000588917 TRBV5-5A0A0J9YX44 114 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 CLDN25C9JDP6 229 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 LMX1BO60663 402 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 SLC25A16P16260 332 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 UBE2V2Q15819 145 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 ARMCX4Q5H9R4 360 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 LIPKQ5VXJ0 399 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 MOGAT3Q86VF5 341 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 C10orf105Q8TEF2 133 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 RAB1CQ92928 201 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 DVL3Q92997 716 aaPredicted RBP16.54■□□□□ 0.24
CIRBP-220ENST00000588917 YIPF5Q969M3 257 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 TMEM106AQ96A25 262 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 SPSB1Q96BD6 273 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 PPP1R3EQ9H7J1 279 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 TMEM106BQ9NUM4 274 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 CKLFQ9UBR5 152 aa16.54■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF469Q96JG9 3925 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-220ENST00000588917 LRP5LA4QPB2 252 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF879B4DU55 563 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 LYNX1G3V0Z9 82 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 MAGEB3O15480 346 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RP2O75695 350 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 LYNX1P0DP58 116 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 FOSL1P15407 271 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 HOXB4P17483 251 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-220ENST00000588917 ATF1P18846 271 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 SOX2P48431 317 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RBP2P50120 134 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 GPM6AP51674 278 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RPS11P62280 158 aaKnown RBP eCLIP16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RIN1Q13671 783 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF671Q8TAW3 534 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 HPSE2Q8WWQ2 592 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RGP1Q92546 391 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-220ENST00000588917 BORCS8Q96FH0 119 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 CPNE2Q96FN4 548 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-220ENST00000588917 OPALINQ96PE5 141 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 RNF7Q9UBF6 113 aa16.53■□□□□ 0.24
CIRBP-220ENST00000588917 A6NLC8 198 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 THBS2P35442 1172 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 CFHR2P36980 270 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 GPR6P46095 362 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-220ENST00000588917 ATP1B3P54709 279 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 ZNF154Q13106 437 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 MPPED2Q15777 294 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 ACSM3Q53FZ2 586 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 SPRNQ5BIV9 151 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 PRAMEF6Q5VXH4 476 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 PHC2Q8IXK0 858 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 PHYHIPQ92561 330 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 Q96MF0 132 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 TMED9Q9BVK6 235 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 TLNRD1Q9H1K6 362 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 OR51I2Q9H344 312 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 UFSP2Q9NUQ7 469 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 C1orf123Q9NWV4 160 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 TREM2Q9NZC2 230 aa16.52■□□□□ 0.24
CIRBP-220ENST00000588917 FAM230AA0A1W2PPH8 454 aa16.51■□□□□ 0.23
CIRBP-220ENST00000588917 PQLC2LA1A4F0 135 aa16.51■□□□□ 0.23
CIRBP-220ENST00000588917 TMEM178BH3BS89 294 aa16.51■□□□□ 0.23
CIRBP-220ENST00000588917 CCRL2O00421 344 aa16.51■□□□□ 0.23
CIRBP-220ENST00000588917 PPIHO43447 177 aaKnown RBP16.51■□□□□ 0.23
CIRBP-220ENST00000588917 SULT1B1O43704 296 aa16.51■□□□□ 0.23
CIRBP-220ENST00000588917 GPX5O75715 221 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms