RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 TMED9Q9BVK6 235 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 SFXN3Q9BWM7 321 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 SAMD10Q9BYL1 202 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 C12orf4Q9NQ89 552 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 PPIL1Q9Y3C6 166 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 USH1CQ9Y6N9 552 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 CARMIL3Q8ND23 1372 aa5.24□□□□□ -1.57
VMP1-208ENST00000588617 MYO3BQ8WXR4 1341 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 IGHV5-51A0A0C4DH38 117 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 IGHV3-64DA0A0J9YX35 117 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 A0A1B0GUA9 196 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 MANBAO00462 879 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 PSPHP1O15172 72 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 MYO1DO94832 1006 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 IGKV1D-16P01601 117 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 RPA3P35244 121 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 GFERP55789 205 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 RAB38P57729 211 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 RAP1AP62834 184 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 CD164Q04900 197 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 ZNHIT3Q15649 155 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 TOMM34Q15785 309 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 ZNF530Q6P9A1 599 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 MDP1Q86V88 176 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 FUNDC1Q8IVP5 155 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 GAPTQ8N292 157 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 OR4K17Q8NGC6 315 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 OR2AE1Q8NHA4 323 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 PHF10Q8WUB8 498 aaKnown RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 EXOSC8Q96B26 276 aaKnown RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 ANKRD9Q96BM1 317 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 ZMYND19Q96E35 227 aaPredicted RBP5.23□□□□□ -1.57
VMP1-208ENST00000588617 DCUN1D5Q9BTE7 237 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 ING2Q9H160 280 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 BICRAQ9NZM4 1560 aa5.23□□□□□ -1.57
VMP1-208ENST00000588617 A0A1B0GX12 115 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 S100A6P06703 90 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 RPS10P46783 165 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 OR10A3P58181 314 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 UBE2IP63279 158 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 IDNKQ5T6J7 187 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 TMEM205Q6UW68 189 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 OR5AK3PQ8NH89 298 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 DCAKDQ8WVC6 231 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 GHSRQ92847 366 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 FAM104AQ969W3 186 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 FLYWCH2Q96CP2 140 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 FAM210BQ96KR6 192 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 NXF2Q9GZY0 626 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 IFI27L2Q9H2X8 130 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 METTL8Q9H825 291 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 WDR54Q9H977 334 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 ABCB9Q9NP78 766 aa5.22□□□□□ -1.57
VMP1-208ENST00000588617 IMP3Q9NV31 184 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 ZNFX1Q9P2E3 1918 aaKnown RBP5.22□□□□□ -1.57
VMP1-208ENST00000588617 IGLV1-50A0A075B6I6 118 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 ZNF705GA8MUZ8 300 aaPredicted RBP5.21□□□□□ -1.58
VMP1-208ENST00000588617 KRBOX1C9JBD0 128 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 C11orf94C9JXX5 98 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 KLRC4-KLRK1H3BQV0 150 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 TAAR5O14804 337 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 TCAPO15273 167 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 CRXO43186 299 aaPredicted RBP5.21□□□□□ -1.58
VMP1-208ENST00000588617 NDUFS5O43920 106 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 SRSF10O75494 262 aaKnown RBP5.21□□□□□ -1.58
VMP1-208ENST00000588617 REM1O75628 298 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 SERPINB7O75635 380 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 KLHL2O95198 593 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 IGKV3-15P01624 115 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 PSMB2P49721 201 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 NDPQ00604 133 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 LAMTOR4Q0VGL1 99 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 PNOCQ13519 176 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 ZNF79Q15937 498 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 PTRHD1Q6GMV3 140 aaKnown RBP5.21□□□□□ -1.58
VMP1-208ENST00000588617 SPICQ8N5J4 248 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 Q8N976 141 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 LINC01555Q8NAE3 123 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 OR13G1Q8NGZ3 307 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 UBA3Q8TBC4 463 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 KCNS1Q96KK3 526 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 OR2M4Q96R27 311 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 METTL26Q96S19 204 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 CAMK2N2Q96S95 79 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 RBBP8Q99708 897 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 ASCL3Q9NQ33 180 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 TET2Q6N021 2002 aaPredicted RBP5.21□□□□□ -1.58
VMP1-208ENST00000588617 ELP1O95163 1332 aa5.21□□□□□ -1.58
VMP1-208ENST00000588617 PIKFYVEQ9Y2I7 2098 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 CECR2Q9BXF3 1484 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 A0A0A6YYH2 397 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 GOLGA6L10A6NI86 522 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 A6NJ64 397 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 TOX3O15405 576 aaPredicted RBP5.2□□□□□ -1.58
VMP1-208ENST00000588617 ADAP1O75689 374 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 CRTAPO75718 401 aaPredicted RBP5.2□□□□□ -1.58
VMP1-208ENST00000588617 DRD3P35462 400 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 TAS2R31P59538 309 aa5.2□□□□□ -1.58
VMP1-208ENST00000588617 CDK5Q00535 292 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms